Shewanella zhangzhouensis: K0H63_17080
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Entry
K0H63_17080 CDS
T09194
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0H63_17080 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szh03019
]
K0H63_17080 (groL)
03110 Chaperones and folding catalysts [BR:
szh03110
]
K0H63_17080 (groL)
03029 Mitochondrial biogenesis [BR:
szh03029
]
K0H63_17080 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
szh04147
]
K0H63_17080 (groL)
Enzymes [BR:
szh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K0H63_17080 (groL)
Messenger RNA biogenesis [BR:
szh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K0H63_17080 (groL)
Chaperones and folding catalysts [BR:
szh03110
]
Heat shock proteins
HSP60 / Chaperonin
K0H63_17080 (groL)
Mitochondrial biogenesis [BR:
szh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K0H63_17080 (groL)
Exosome [BR:
szh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K0H63_17080 (groL)
Exosomal proteins of other body fluids (saliva and urine)
K0H63_17080 (groL)
Exosomal proteins of breast cancer cells
K0H63_17080 (groL)
Exosomal proteins of colorectal cancer cells
K0H63_17080 (groL)
Exosomal proteins of bladder cancer cells
K0H63_17080 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QYK04743
LinkDB
All DBs
Position
complement(3874149..3875786)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVVFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLEKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVIELKALSQECADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDNPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGAEEQIKARVGQIKQQIEETTSDY
DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKISDVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA
GNDSYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVAELPKADAPDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaacgacgcccgcgtaaaaatgctggccggtgta
aacgtactggccaacgccgttaaagtgaccctgggccccaaaggccgtaacgtggttctg
gaaaagagcttcggcgcgccgcttatcaccaaagacggtgtgtctgtggccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcccagatggtgaaggaagtggcttccaag
gccaacgacgctgccggtgacggcaccaccaccgctaccgtactggctcaggccattgtt
aacgaaggtctgaaggccgttgccgcgggcatgaacccaatggatctgaagcgcggtatc
gacaaagccgttgccgccgccgttatcgaactcaaagccctgtctcaggaatgtgccgac
tccaaggccattgcccaggtaggtaccatctctgccaactctgacgagtccatcggtcaa
atcattgccaccgccatggaaaaagtgggcaaagaaggcgttatcaccgttgaagaaggt
caggcgctggaaaacgaactggacgtagtagaaggtatgcagttcgaccgcggttacctg
tctccttacttcatcaacaagcctgaaaccggctctgttgaactggacaacccattcgtg
ctgctggttgacaagaagatctccaacatccgcgaactgctgcctatcctcgaaggtctg
gccaagaccggcaagccactgctgatcgttgccgaagacgtggaaggcgaagccctggcc
actctggtagtgaacaacatgcgcggtatcgtgaaggttgctgccgttaaagccccaggc
tttggtgaccgtcgcaaggccatgctgcaggatatcgccatcctcaccggtggtactgtt
atcgccgaagaaatcggtctggagctggaaaaagccaccctggaagacttgggtactgcc
aagcgcgttgtgatcaccaaggacaacaccaccatcatcgatggcaacggtgccgaggag
cagatcaaggctcgcgtgggtcagatcaaacagcaaatcgaagaaaccacgtccgattac
gaccgtgaaaaactgcaagagcgtatggccaagctggccggcggtgttgccgttatcaag
gttggcgctgccaccgaagtggaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgccacccgcgccgccgttgaagaaggtgtggttccaggcggcggtgtagccctggta
cgcgttgcttccaagatcagcgacgttgaagtagccaacgaagatcagaagcacggtgtg
gttatcgccctgcgcgccatggaagccccactgcgccaaatcgccaccaacgccggtgaa
gaagcctctgtagtggccaacactgtgaagaacggctccggtaacttcggttacaacgcc
ggtaacgacagctacggcgacatgctggaaatgggtatcctggacccaaccaaggtaacc
cgctcagcgctgcagttcgcagcctctgtagccggtctgatgatcaccaccgaagccatg
gtagccgagctgccgaaggccgatgcccctgatatgggtggtatgggtggtatgggcggt
atgggcggcatgatgtaa
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