Shewanella zhangzhouensis: K0H63_17130
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Entry
K0H63_17130 CDS
T09194
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
szh03021
]
K0H63_17130 (rapA)
Transcription machinery [BR:
szh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
K0H63_17130 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QYK04753
LinkDB
All DBs
Position
3892069..3894972
Genome browser
AA seq
967 aa
AA seq
DB search
MSFAVGQRWISDTESELGLGTVVQIEGRMVTLLFPATGENRMFAMAEAPLTRVIYNPGDT
IDSAEGWGMTVDKVEELNGLVFYLGKRTDTGEDTMLRETLLEHNIRFNKPQDRLYAGQID
RIERFGVRYKAQLLRHKQATSPLLGLQGPRVGLIPHQLWIAHEVGRRHAPRVLLADEVGL
GKTIEAGLIIHQQLMTGRAERVLVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAFAD
HDNPFYTEQLVICSLELLRKKRRLEQALDADWDLMVVDEAHHLEWSEDEPSRAYQVVEAL
AEVVPGVLLLTATPDQLGHQSHFARLRLLDPDRFYDYQAFLDEEKGYQAVAEAADALASG
VKLSDEAINGLTELLSEKDIAPAIRQIQAENLDEELRQAARDELLQELLDRHGTGRVLFR
NSRASVKGFPKREFHSHGFELPEQYVTAMRVNAMMGGARTQEARVAQALSPERIYQEFDD
NNASWWKFDPRVDWLIDFLKSHRSKKVLVIASRAETALALEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR
IGQRHDVQIHLPFLKHTAQEQLMHWYHEGLCAFELTCPGGHVLFGEFKERLLSVLTGESD
ELDELMADTKARYKALKAAMEQGRDKLLELNSHGGAKAEAITASLSDADEDTDLIASVIR
LWDVIGIDQDDKGENSIVLRTTDHMMYPTYPGLNEDGVTVTFDRNTALSRDDIALITLEH
PLVQTGLDLITGSDTGTTCVALLKNKALPAGTIFLELIYLAETTAPKASQLYRYLPPTPV
RVLLDKNGNNLSDKVDYDSFDKQLSGVNRHIASKLVNASQTMLHPLFAKGEEFAGEALNT
LTQDARARMESQLGAELSRLEALKAVNPSIREEELEHLRQMMQELSGYLGNTQLKLDAIR
LVLVSHN
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgcggttgggcagcgctggatcagtgatacagaatcggaattgggtttgggc
acagtggtgcagatagagggccgcatggttactctgctgtttcctgccaccggtgaaaac
cgcatgtttgccatggccgaagcgccccttacccgggtgatatacaaccccggagacacc
atcgacagcgccgaaggctggggtatgacggtggacaaggtcgaagaattgaacggcctg
gtattttatttgggcaagcgtaccgacacgggtgaagacaccatgctgcgcgagaccctg
ctcgagcacaatattcgcttcaacaagccccaggatcgcctgtacgctggccagattgac
cgtatcgagcgctttggcgtgcgttacaaggcgcagcttttgcgccacaagcaggccacc
tcgccactgctgggcctgcagggtccacgggttggtctgattccacaccagttgtggatt
gcccatgaagtaggccgtcgccacgccccgcgggtattgcttgccgacgaagtgggtttg
ggtaaaaccatcgaagcgggtctgattatccaccaacagctgatgacaggccgcgccgag
cgggtactggtgatagtgcccgataccctgcgccaccagtggctggtggaaatgctgcgc
cgcttcaacctgcgcttctcggtatttgatgaagaccgctgcgtggaggcctttgccgat
cacgacaaccccttctacacagagcagctggtgatttgctcgctggagctgctgcgcaag
aagcgccgattggagcaggcgctggatgccgattgggatctgatggtggtggacgaagcc
caccacctggagtggagcgaagacgagcccagccgtgcctaccaggtggttgaggccctc
gctgaagtcgtacccggggtactgctgctcaccgcaaccccggatcagctgggtcatcag
agccactttgcccgtttgcgcctgctcgaccccgaccgtttttacgactatcaggccttc
ctcgacgaagaaaaaggctaccaggccgtggccgaagccgccgatgccctggcaagcggc
gttaagctgtccgatgaggccatcaacggcctgaccgagcttttgtcggagaaagacata
gccccggccattcgtcaaattcaggccgaaaacctcgacgaagagctgcgccaggccgcc
cgcgacgagctgctgcaggagcttctggatcgccacggcaccggccgggtactgttccgt
aacagccgcgcctcggtaaaaggcttccccaagcgcgagttccacagccacggcttcgaa
ctgcctgagcaatacgtaactgccatgcgggtaaatgccatgatgggcggcgcccgcacc
caggaagcccgggtggcccaggccctgagccccgagcgtatctatcaggaattcgatgac
aacaacgccagctggtggaagttcgacccaagggtcgactggcttatcgactttttgaaa
tcccatcgctccaagaaggtgctggtgattgccagccgcgccgaaacggcactggcactg
gaagaagccctgcgcacccgcgaaggcatacaggccaccgtgttccatgaaggcatgtcc
atcattgagcgcgataaggccggtgcttactttgcccaggaagaaggtggcgcccaggcg
ctgatttgctctgaaatcggctcggaaggccgtaacttccagtttgccagccacctggtg
ctgttcgacctgcccctgaacccggatctgctggagcagcgtatcggccgtctggaccgt
attggtcaacgccacgatgtgcagattcacctgccgttcctcaagcacaccgctcaggaa
caactgatgcactggtaccacgaaggcctgtgcgcgttcgaactcacctgccccggtggc
catgtgctctttggcgagtttaaagagcgcctgctcagtgtgctgaccggagagagcgat
gagctggacgagctgatggccgacaccaaggcccgctacaaggcgcttaaagccgccatg
gagcagggtcgcgacaagctgctggaactcaacagccacggcggtgccaaggccgaagcc
atcaccgcgagcctcagcgacgccgatgaggataccgaccttatcgcctcggtgatccgc
ctgtgggacgtgataggcatagatcaggacgacaagggcgaaaactccatagtgctgcgc
accacggatcacatgatgtaccccacctatcccggcctcaacgaggatggggtgactgtg
accttcgatcgcaacacggcgctgtcgcgggacgatatcgcccttatcaccctggagcat
ccactggtgcaaaccggcctggatctcatcacgggctcagatacgggcaccacctgtgtg
gcactgctgaaaaacaaggcgctgccggcgggcacgattttcctcgagctgatttacctc
gccgaaaccacggcgcccaaggccagccagctgtaccgctatctgccgcccacgccggta
cgtgtgctgctggacaagaacggcaacaacctgtctgacaaggtggactacgacagcttc
gacaagcagctgtccggggtgaatcgccatatcgccagcaagctggttaacgcctctcag
accatgctgcatccactgtttgccaagggtgaagagtttgccggtgaggcactgaacacc
ctgactcaggacgccagggcgcgtatggaaagccagctgggcgcggagctttcaaggctc
gaggccctcaaggccgtgaaccccagcatccgtgaagaggagctggagcacctgcggcag
atgatgcaggaactctcgggctaccttggcaacactcagctgaagctggacgccatccgc
cttgtactggtgagccacaactaa
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