Shewanella zhangzhouensis: K0H63_17575
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Entry
K0H63_17575 CDS
T09194
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0H63_17575 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szh03019
]
K0H63_17575 (rhlB)
Enzymes [BR:
szh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K0H63_17575 (rhlB)
Messenger RNA biogenesis [BR:
szh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K0H63_17575 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
SgrT
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QYK04835
LinkDB
All DBs
Position
complement(3983595..3984914)
Genome browser
AA seq
439 aa
AA seq
DB search
MSETHLTQQKFADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKT
LAFLVATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQIAKDATLLSKHSGLKVGIVYG
GEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIR
FLFNRMPGAKERLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSM
EDKLKLLHSLIEEDWPEKAIVFANTKYQCENLWASLEADGHRVGLLTGDVPQKKRLKILE
QFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFA
CEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPPPVKIHRKPHAGGRNLRDRNGSPRPSG
SHRSGSGRPPRHDRTRRHS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacacacttaacccaacaaaaatttgccgacctgcccttgtgtgacgaggtc
aaacaggcacttaacgaaaacggcttcgagcattgcacgcccatccaggcgctttccctc
ccggtattgcttgagaaaaaagacatcgcaggccaggcccaaactggcaccggcaagaca
ctcgcctttttggttgccacctttaaccacctgctgaccacgccggtccccgaacatcgc
caactgaatcagccccgtgccattgtgatggcgccaacccgcgaactggcgattcagatc
gccaaagacgccactctgctgtccaagcacagcggcctcaaggtgggtatcgtctacggc
ggcgaaggctatgaagcccagcgcaaggtgctggacaagggcgtggatgttctcattggc
accacgggtcgcatcatcgactatgtgcgtcagggcgtgattaacctgggtgctatccag
gccgtggtattggatgaagccgatcgcatgttcgacctcggttttatcaaagacatccgt
tttcttttcaaccgtatgccaggcgccaaagagcgtttgaacatgctgttctctgccact
ctgtccatgaaggtgcaggagctggcgtacgatcatatgaacgaccccgtgaaggtagaa
attgccccggaagaaaagacttcccgcaatatcaaagaagaaatcttctacccttccatg
gaagacaaactcaaactgctgcactcactgattgaagaagactggcccgaaaaagccatt
gtgtttgccaacaccaagtatcagtgtgagaacctgtgggcgagcctggaggccgatggc
caccgtgtgggcctgctgaccggtgatgtgccgcagaagaagcgcctgaaaatcctcgag
cagttcacccagagtgagctggatattctggtggccaccgacgttgcggcccgtggtctg
cacatttctgatgtgtcccacgtgtacaactacgacctgcccgatgactgcgaagactat
gtacaccgtatcggtcgtaccggtcgtgccggtcagaaaggggtatcggtgagctttgcc
tgtgaggaatatgccctcaacctgcctgccatcgaagactatatcaagcacagcatccct
gtgacttcttatgatcgtgatgccctgattgatattccacctccggtgaaaatccatcgt
aagccccatgccggtggccgtaacctgcgcgatcgcaatggctcgccacgtccgtctggc
tcccatcgcagcggcagtggtcgtcctccccgccatgacaggacccgcagacactcataa
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