Shewanella zhangzhouensis: K0H63_18770
Help
Entry
K0H63_18770 CDS
T09194
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
szh03000
]
K0H63_18770
Transcription factors [BR:
szh03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0H63_18770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
AAA_5
PAS_4
AAA_3
HTH_30
Phage-MuB_C
HTH_23
PAS_8
HTH_29
Mg_chelatase
HTH_28
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QYK05059
LinkDB
All DBs
Position
complement(4255767..4257545)
Genome browser
AA seq
592 aa
AA seq
DB search
MKSAVQPWLADSWRRSEGAGLSETRPGELKLSRVELDERCERHRQLIALVESEALPLFTR
LMAHTDSRLILSDAEGFVLRHWGLSRYSDRLANVALDCGVNWLEEHKGTNAIGTALKAKE
ALSVVGEQHFCRPHRFMSCTASPIFSPSGELIGALDITSERLKHNQQTLLLISSLAQQVE
TALLCALPGGRFRVDLAASRQLLSSGWQGILIADDDGRLLGLNPMARQYLGGASPGMQLG
ELLGDDWQAQQAQCLRGELHLATSAIGEGALSIPTNKASSLHGIKPLRFHDPQLETAWQQ
ARKVVSRKIPLLVQGETGVGKEHFVRQLYQDSRLDGELVAVNCAALPAELIEAELFGYQG
GAFTGAARQGHLGKVRQADGGFLFLDEIGELPLAAQGRLLRVLQEREVTPVGGLKSHRVD
IQVVAATHMDLAAMVRDGRFREDLYFRLNGLQVSLPPLRQRADKSRLIHKLHRQYRVNPP
GDEQRLCPKLLALLEAYGWPGNLRELDNLMQVACLMAEGERELSEAHLSDAHRRTLMQGQ
EVQSASEPSLKAGLDGRIQTTLSECDGNISEAARRLGVSRNLIYRSLKRTDS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgccgtacagccctggcttgccgactcctggcgtcgcagtgaaggcgccggt
ctcagtgaaacccgtcccggggaacttaagctctcccgggtcgaactggatgagcgctgt
gagcgccaccgtcagcttatcgcattggtggaatccgaagccctgccgctgtttacccgt
ctgatggcccacaccgacagcaggctgattttgtcggacgccgagggttttgtattgcgc
cactgggggctgtcgcgctactccgaccggctcgccaacgtggcgctggactgcggcgta
aattggctcgaagagcacaagggtaccaatgccataggcacagcgcttaaggccaaagaa
gccctctcagtggtgggtgagcaacacttttgccgcccccaccgttttatgagctgcacc
gccagcccgattttttcgccgtccggcgagctgattggtgccctcgacatcacctccgag
cggctcaagcataaccagcaaaccttattgcttatctccagcctggcgcagcaggtggaa
actgcgcttctgtgcgcgctgcccggtggccgttttcgggtggatttggccgccagtcga
cagcttctgagctccggctggcagggcattctgattgccgatgacgatggccgtttgctt
gggcttaaccccatggcccgccagtatctgggcggcgcctcgcccggtatgcaactgggc
gagctgttgggggatgactggcaggcacagcaggcgcagtgccttcgcggcgagctgcat
ttggccacctcggccattggcgagggcgccttgtcgattccaaccaataaggccagcagt
ttgcacggtatcaagccgctgcgattccacgacccacagctggaaaccgcctggcagcag
gcgcgcaaggtcgttagccgcaagatcccgctgttggtgcagggggaaaccggggtgggt
aaagagcacttcgtgcgccagctgtatcaggacagtcgcctcgatggtgagctggtggcg
gttaactgtgctgccttgcccgccgagctgatcgaggccgagctttttggttatcagggc
ggcgcctttaccggcgcagcccgtcaggggcaccttggcaaggtgcgtcaggccgatggc
ggctttctgtttctggatgaaatcggtgagctgccgctggcggctcagggccggttgttg
cgggtactgcaggagcgggaagtgacccctgtgggcggccttaaaagccacagggtggac
attcaggtggtggcggctacccacatggatttggctgccatggtacgtgatggccgtttt
cgtgaggacctgtattttcgcctcaacggtctgcaggtcagcctgccgccattgaggcaa
cgggcagataaatcgcggctgatccacaagcttcaccgccagtatcgggtcaatccgccg
ggggatgagcagcggctgtgcccgaagttactggcattgctggaggcctatggctggccg
gggaaccttcgggagctggataacctgatgcaggttgcctgcctgatggctgaaggggag
cgcgaacttagtgaggcgcacttgagtgatgcccacaggcggacactgatgcagggccaa
gaggtgcaatcagcttctgagccgagccttaaggccgggcttgatggccgtattcagaca
acgctctctgagtgcgacggcaatatcagtgaagcggctcgccgtcttggggtaagccgc
aacctgatttaccgcagccttaagcgcaccgacagttag
DBGET
integrated database retrieval system
