Shinella zoogloeoides: K8M09_00080
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Entry
K8M09_00080 CDS
T07727
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
szo03032
]
K8M09_00080
03036 Chromosome and associated proteins [BR:
szo03036
]
K8M09_00080
03400 DNA repair and recombination proteins [BR:
szo03400
]
K8M09_00080
DNA replication proteins [BR:
szo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K8M09_00080
Chromosome and associated proteins [BR:
szo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K8M09_00080
DNA repair and recombination proteins [BR:
szo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K8M09_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Regnase_1_C
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UEX83761
LinkDB
All DBs
Position
13611..13928
Genome browser
AA seq
105 aa
AA seq
DB search
MFEGDTVIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVK
NRPSRSGRNPRTGDAVFVEEKWVPFFKTGKELRERLNPGQADQDD
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atttttgagggggatacagtgatcaagtcggaactggtgcagatcgtcgcagcccgcaat
ccccacctctatcaccgcgacgtcgagaacatcgtcaatgcggtgctggacgagatcacc
gatgcgctggccgccggcaatcgtgtcgagctgcgcggcttcggcgccttttccgtcaag
aaccgtccctcgcgctccggccgcaacccgcgcacgggcgatgcggtcttcgtcgaggag
aagtgggttccgttcttcaagacaggcaaggagctgcgcgaacgcctcaaccccggtcag
gccgaccaggacgattga
DBGET
integrated database retrieval system
