Shinella zoogloeoides: K8M09_00265
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Entry
K8M09_00265 CDS
T07727
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szo03016
]
K8M09_00265 (truA)
Enzymes [BR:
szo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
K8M09_00265 (truA)
Transfer RNA biogenesis [BR:
szo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K8M09_00265 (truA)
Prokaryotic type
K8M09_00265 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UEX81789
LinkDB
All DBs
Position
53175..53918
Genome browser
AA seq
247 aa
AA seq
DB search
MPRYRLRIEYDGTPYVGWQRQDNGPSVQGAIEAAILSLTGETVSIRGAGRTDSGVHAMGQ
VAHADLSRPWKEHTLRNALNAHLGMAGERVAILDAAEVPDDFDARFSAVKRHYLYRIVSR
RAPLALEANRAWFVAKELDHEAMHAVGQVLVGKHDFTTFRAAQCQANSPVRTIDRLEVTR
SGDLIEMRVSAQSFLHNQIRSFAGTLKLAGEGKWTVEDVRAALEARDRKACGPVAPPDGL
YFMAVDY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctatcgcctgcgcatcgaatatgacggcacgccctatgtcggctggcagcgg
caggacaacggtccttccgtgcagggcgccatcgaggcggcgatcctgtcgctgacgggt
gagacggtctcgatccgcggggcggggcgcacggattccggcgtgcatgccatggggcag
gtcgcccatgccgatctgtcgcgcccgtggaaggagcacacgctcaggaacgcgctcaac
gcgcatctcggcatggccggcgagcgtgtcgcgatcctcgacgcggctgaagtgccggac
gatttcgacgcccgcttttccgcggtgaagcggcattatctctaccgcatcgtctcgcgc
cgcgcgccgctggcgctggaggcgaaccgcgcctggttcgtcgccaaggaactggatcac
gaggccatgcatgcggtggggcaggtgctcgtcggaaaacacgacttcaccaccttccgc
gccgcgcaatgccaggcgaacagccccgtgcgcaccatcgacaggctcgaggtgacgcgc
agcggcgacctcatcgagatgcgcgtgtcggcgcagagcttcctgcacaatcagatccgc
tcctttgccggcacgctgaagctggcgggcgagggcaagtggacggtggaggacgtgcgc
gccgcgctggaggcgcgcgaccgcaaggcctgcggccccgtcgccccgccggacgggctg
tatttcatggccgtcgattactga
DBGET
integrated database retrieval system
