Shinella zoogloeoides: K8M09_00275
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Entry
K8M09_00275 CDS
T07727
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00300
Lysine biosynthesis
szo01100
Metabolic pathways
szo01120
Microbial metabolism in diverse environments
szo01230
Biosynthesis of amino acids
Module
szo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K8M09_00275 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
szo01002
]
K8M09_00275 (dapE)
Enzymes [BR:
szo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
K8M09_00275 (dapE)
Peptidases and inhibitors [BR:
szo01002
]
Metallo peptidases
Family M20
K8M09_00275 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UEX81791
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Position
complement(54508..55707)
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AA seq
399 aa
AA seq
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MPKTSADPIENLATLIRCPSVTPAEGGALTALAAMLEPLGFTVERMIAREPGMPDIENLY
ARIGTEGPHLMFAGHTDVVPVGDEAAWTHDPFGAEISGGEMFGRGAVDMKGGIACFVAAV
ARQIGKNGPPKGSLSFLITGDEEGPAVNGTIKLLEWAATRGERWDACLVGEPTNPDQLGD
MIKIGRRGSVSGTLTVHGVQGHAAYPHLADNAVRGVIALTDALMHPPFDAGTESFQPSNL
EVTTIDTGNRATNVVPARASASFNIRFNDSWTAETVMAEIVRRLDAAAQDERLRPGRDPV
RYDIEWAERPSHVFLTRNNQLIASLSGAVEAVTGRAPKLSTTGGTSDARFIKDYCPVVEF
GLVGQTMHMVDERVAVADLETLTVIYETFIERWFGDARS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacctccgccgacccgatcgaaaacctcgccaccctcatccgctgcccctcc
gtgacgcccgccgagggcggcgcgctgacggcgcttgccgccatgctggagccgctcggc
ttcacggtggaacgcatgatcgcccgcgagccgggcatgcccgatatcgagaacctctat
gcccgtatcggcaccgagggaccccacctgatgttcgccggccatacggacgtcgtgccc
gtcggcgacgaggccgcctggacgcatgacccgttcggcgcggagatttccggcggcgag
atgttcggccgcggcgcggtggacatgaagggcggcatcgcctgcttcgtcgccgccgtc
gcacgccagatcgggaagaacggcccgccgaaaggctcgctctccttcctcatcaccggc
gacgaggaaggcccggccgtcaacggcacgatcaagctgctggaatgggcggcgacacgc
ggcgagcgctgggatgcctgcctcgtcggcgagccgaccaatccggaccagctcggcgac
atgatcaagatcggccggcgcggctccgtctccggcacgcttaccgtgcatggcgtgcag
ggccatgccgcctatccgcatcttgccgacaatgccgttcgcggcgtgatcgcgctgacc
gacgcgctgatgcatccgcccttcgacgccggcacggaaagcttccagccgtcgaacctc
gaagtgacgaccatcgacaccggcaaccgcgccaccaatgtcgtgccggcgcgggcgagc
gccagcttcaacatccgcttcaacgatagctggacggccgagaccgtgatggccgagatc
gtgcgccgcctcgacgccgccgcgcaggacgaaaggctccgccccggccgcgaccccgtg
cgctacgacatcgaatgggccgaacggccgagccacgtcttcctcacgcgcaacaaccag
ctcatcgcctcgctgtccggcgctgtcgaggccgtgaccggccgtgcgccaaaactgtcg
acgacgggcggcacgtccgatgcacgcttcatcaaggactattgccccgtcgtggaattc
ggcctcgtcggccagaccatgcatatggtggacgagcgggtggcggtggccgatctcgag
acgctgaccgtgatctacgagaccttcatcgagcgctggttcggcgatgcccggtcttga
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