Shinella zoogloeoides: K8M09_00660
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Entry
K8M09_00660 CDS
T07727
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00061
Fatty acid biosynthesis
szo00071
Fatty acid degradation
szo01100
Metabolic pathways
szo01212
Fatty acid metabolism
szo02024
Quorum sensing
szo04146
Peroxisome
Module
szo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K8M09_00660
00071 Fatty acid degradation
K8M09_00660
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K8M09_00660
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8M09_00660
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
szo01004
]
K8M09_00660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
szo04147
]
K8M09_00660
Enzymes [BR:
szo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K8M09_00660
Lipid biosynthesis proteins [BR:
szo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K8M09_00660
Exosome [BR:
szo04147
]
Exosomal proteins
Exosomal proteins of breast milk
K8M09_00660
Exosomal proteins of breast cancer cells
K8M09_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UEX81853
LinkDB
All DBs
Position
complement(139484..141184)
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AA seq
566 aa
AA seq
DB search
MPATETHPSTQPSGRFWLASYPEGIAGEIAPLGHSSIGALVESCCAQYGERPAFTSMGKT
LTFRDFDAASRNIAAWLQARGLEKGDRVAVMMPNILQNPVIIFGILRAGLVVVNVNPLYT
PRELEHQLKDAGAKALFVLENFATTVAQVVSRTAVRHVVVTTMGDMLGLKGLIVNLVVRK
VKKLVPEWSLPGHIPFKQVMAEGARSAVKPVSIVPGDTAFLQYTGGTTGVSKGATLTHAN
LLSNMEQIKLWIEPVFRIKKRPQQLTFICALPLYHIFALTVNGLAGIALGGHNVLIANPR
DIPAFVKELGKYHPHVFPGLNTLFNALMNNPDFSKLDFSELVLTLGGGMAVQRPVAERWQ
KMTGCSITEGYGLSETSPVATANRFDKPEFTGTIGLPLPSTDIEIRDDEGRTLPVGEVGE
ICIRGPQVMAGYWQRPDETAKVMTPDGFFRSGDIGFMTAEGFTKIVDRKKDMILVSGFNV
FPNEVEEVAMSHPGILECAAIGVPDEHSGEAVKLFVVKKDPALTEADVKAHCAANLTNYK
RPKFVEFRAELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccggccactgagacgcacccttccacgcagccgtccggccgcttctggctcgcctcc
tatccggagggcattgccggcgagatcgcgccgctcgggcacagctccatcggcgcgctc
gtggaaagctgctgcgctcaatatggcgagcgcccggccttcaccagcatgggcaagacg
ctgaccttccgggatttcgacgccgcctcgcgcaatatcgccgcctggctgcaggcgcgc
gggcttgaaaagggcgaccgcgtcgccgtgatgatgccgaacatcctgcaaaaccccgtc
atcatcttcggcatcctgcgggccggcctcgtcgtggtgaacgtcaatccgctctatacg
ccgcgcgaactggagcaccagttgaaggatgcgggcgccaaggcgctgttcgtgctggag
aatttcgcgaccaccgttgcgcaggtcgtctcgcgcacggccgtcaggcacgtggtcgtc
accacgatgggcgacatgctcggcctcaagggcctcatcgtcaatctcgtcgtgcgtaag
gtcaagaagctcgtgccggaatggtcgctgccgggccatatccccttcaagcaggtcatg
gcggagggcgcgcgcagcgcggtgaagccggtcagcatcgtgccgggcgacacggccttc
ctgcaatataccggcggcacgacgggcgtttccaagggcgcgacgctgacccatgcgaac
ctgctttccaacatggagcagatcaagctgtggatcgagccggtcttccgcatcaagaag
cggccgcagcagctcaccttcatctgcgccctgccgctctaccacatcttcgcgctgacg
gtgaacgggctggcgggcatcgcgctcggcggccataacgtgctgatcgccaatccgcgc
gacattcccgccttcgtcaaggaactgggcaagtaccatccccacgtcttcccgggcctc
aacacgctgttcaacgcgctgatgaacaatccggacttctccaagctcgatttctccgag
ctcgtgctgacgctcggcggcggcatggcggtgcagcgcccggtcgccgaacgctggcag
aagatgacgggctgctccattaccgaaggctacggcctttccgagacgtcgccggtggcc
accgccaaccgcttcgacaagccggaattcaccggcacgatcggccttcccctgccctcc
accgatatcgagatccgcgacgacgagggccgcaccctgccggtcggcgaagtcggcgag
atctgcatccgtggcccgcaggtcatggccggctactggcagcgcccggacgagacggcc
aaggtgatgaccccggacggcttcttccgctccggcgacatcggcttcatgacggcggaa
ggtttcaccaagatcgtcgaccgcaagaaggacatgatcctcgtctccggcttcaacgtc
ttccccaacgaggtggaggaagtggccatgtcgcatcccggcatcctcgaatgcgcggcc
atcggcgtgccggacgagcattccggcgaggcggtgaagctgttcgtggtgaagaaggac
cccgcgctgacggaggccgacgtaaaggcccattgcgcggccaacctcaccaattacaag
cggccgaaattcgtggagttccgcgccgaactgccgaaatccaatgtcggcaagatcctg
cgcaaggatctccggggctga
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