Shinella zoogloeoides: K8M09_01480
Help
Entry
K8M09_01480 CDS
T07727
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00280
Valine, leucine and isoleucine degradation
szo00650
Butanoate metabolism
szo00907
Pinene, camphor and geraniol degradation
szo01100
Metabolic pathways
szo01120
Microbial metabolism in diverse environments
szo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
K8M09_01480
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K8M09_01480
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K8M09_01480
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K8M09_01480
Enzymes [BR:
szo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
K8M09_01480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UEX81999
LinkDB
All DBs
Position
293295..294170
Genome browser
AA seq
291 aa
AA seq
DB search
MSRRVEIVEMAARDGLQNEKKIIPSADKIALIDRLSDCGFERIEATSFVSPKWVPQLADG
AAVMAGIARRPGVSYAALVPNMKGYEAAKATGVNEVAVFLSASEGFSRANLNCSIAESVE
RVRPVAEAAKADGLLLRGYVSCVVQCPYDGPVEPCAVARVTSQLLRLGCHEVSLGDTIGR
ARPAEVAAMLDVVLAVAFPENLAGHFHDTNGLALDNIRVALDHGLTVFDASVGGLGGCPY
APGARGNVDTLAVADMLAAEGYETGLDRQKLAAAAAFARRITGKDDTRKSA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcgtcgaaatcgttgagatggcggcccgcgacgggttgcagaacgagaag
aagatcattccttccgccgacaagatcgcgctgatcgatcgtctctccgattgcggtttc
gagcgtatcgaggcgacgagtttcgtcagccccaaatgggtgccgcaactggctgacggt
gccgccgtgatggccggtatcgcgcgccgcccgggtgtctcctatgcggcgctggtgccg
aacatgaagggctacgaggcggcgaaggccaccggcgtcaacgaggtcgccgtcttcctt
tcggcgtccgaggggttttcccgcgccaatctcaattgctcgattgccgaaagcgtcgag
cgtgtccgcccggtcgcggaggcggcgaaggcggatgggctgttgctgcgcggctatgtg
agctgcgtcgtgcaatgcccctatgacgggccggtcgaaccctgcgcggtggcgcgggtg
acgagccagctcctgcgcctcggctgccatgaggtgagccttggcgacacgatcggccgg
gcgcggcccgccgaggtcgccgccatgctggatgtcgtgctcgccgtcgccttcccggaa
aatctcgccggccatttccacgatacgaacgggctggcgctcgacaatatccgcgtggcg
ctggatcatggcctcaccgtcttcgacgcctcggtcggcgggctcggcggttgcccctat
gcgccgggcgcgcggggcaatgtcgatacgctggccgtcgccgacatgctggcggcggaa
ggctacgagacggggctggaccggcagaagctggcggcggcggccgccttcgcacggcgg
atcaccggcaaggacgatacaaggaagagcgcgtag
DBGET
integrated database retrieval system