Shinella zoogloeoides: K8M09_01595
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Entry
K8M09_01595 CDS
T07727
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szo03016
]
K8M09_01595 (truB)
Enzymes [BR:
szo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K8M09_01595 (truB)
Transfer RNA biogenesis [BR:
szo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K8M09_01595 (truB)
Prokaryotic type
K8M09_01595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UEX82019
LinkDB
All DBs
Position
322148..323080
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AA seq
310 aa
AA seq
DB search
MSRPRKPKGRPVSGWLILDKPFDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERTTDDLEGEVTRSSDKRPTADEIKAILGEYTGVI
QQIPPQFSAIKIDGERAYDLAREGETVEIPSREVEIHRLTLIGSDENTAAFEVECGKGTY
VRALARDFGRQLGCYGHISALRRTFVAPFGEDDLVPLADLTALEKIEDEAERLAALDAFL
IDTGEALSSLPQIVINDDQAHRLRMGNPIILRGRDAPVSADEAYATARGKLVAIGEIGGG
EFRPKRVFAG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccccgcaaacccaagggccggccggtttccggctggctgatcctcgacaag
cccttcgatttcggctcgaccgaagccgtctccaagatcaagtggctgttcaaggcgcag
aaggccggccatgccggcacgctcgacccgctggcctccggcatgctgccgatcgcgctg
ggcgacgccaccaagaccgttccctatgtcatggatggccgcaagatctacgaattcacc
gtgacctggggcgaggagcgcacgacggacgacctcgaaggcgaggtgacgcgaagctcc
gacaagcgcccgaccgcggacgaaatcaaggcgatcctcggcgaatataccggcgtgatc
cagcagatcccgccgcagttctccgcaatcaagatcgacggcgaacgcgcctatgacctt
gcccgcgagggcgagacggtcgaaatcccctcgcgcgaggtggaaatccaccgcctgacg
ctgatcggctcggacgagaacacggcggccttcgaggtcgagtgcggcaagggcacctat
gtgcgcgcgctcgcccgcgacttcggccgccagctcggttgctatggccatatctcggcg
ctgcgccgcaccttcgtcgcgcccttcggcgaggacgacctggtgccgctcgccgacctg
acggcgctggagaagatcgaggacgaggcggaacgcctcgccgccctcgacgccttcctc
atcgacaccggcgaagcgctgtccagcctgccgcagatcgtcatcaacgacgatcaggcg
caccgcctgcgcatgggcaatcccatcatcctgcgcggccgcgacgcgccggtttcggcg
gatgaggcctatgccacggcgcgtggcaagctggttgcgatcggcgagatcggcggcggc
gagttccgcccgaagcgggttttcgccggctga
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