Shinella zoogloeoides: K8M09_03225
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Entry
K8M09_03225 CDS
T07727
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K8M09_03225 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
szo01007
]
K8M09_03225 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szo03016
]
K8M09_03225 (hisS)
Enzymes [BR:
szo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
K8M09_03225 (hisS)
Amino acid related enzymes [BR:
szo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K8M09_03225 (hisS)
Transfer RNA biogenesis [BR:
szo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
K8M09_03225 (hisS)
Prokaryotic type
K8M09_03225 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Peripla_BP_3
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
UEX82314
LinkDB
All DBs
Position
662057..663571
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AA seq
504 aa
AA seq
DB search
MSEKQKKPQKLKARLPRGFVDRDAADIRAVNEMTARIREVYERYGFDPVETPLMEYTDAL
GKFLPDSDRPNEGVFSLQDDDDQWMSLRYDLTAPLARHVAENFNEIQLPYRTYRAGYVFR
NEKPGPGRFRQFMQFDADTVGAAGVQADAEMCMMFADTMEALGIKRGDYVIRVNNRKVLD
GVLEAIGLGGEDNAGARLTVLRAIDKLDKFGPEGVRLLLGEGRKDESGDFTKGARLNADQ
IEKVLFFVGIKDYAQSAADLAKLVEGSARGSEGVEELNQIGHLVTSAGYRPDRIKIDPSV
VRGLEYYTGPVFEAELQFAVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGV
SRLMTALKNLGKLGQSEVVAPVLVTVMDGDIESMGRYQRFTQELRAAGIRAEMYQGNWKK
FGNQLKYADRRNAPIAIIQGGDERAEGVVQIKDLIEGKRLSGEIEDNTSWREARVAQVSV
PEAEFVAKVREILEAQAEDRARAV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagcagaaaaaaccgcagaagctgaaagcccgcctgccgcgcggctttgtc
gaccgtgacgccgcggacattcgcgccgtgaacgagatgaccgcgcgtatccgcgaggtc
tacgagcgctacggcttcgacccggtcgaaacgccgctgatggaatataccgacgcgctc
gggaaattcctgccggacagcgaccgtcccaacgagggcgtgttctcgctgcaggacgac
gacgaccagtggatgagcctgcgctacgacctgacggcgccgctcgcccgccatgtcgcg
gagaatttcaacgagatccagcttccctaccgcacctatcgcgccggctacgtcttccgc
aacgagaagcccggcccgggccgcttccgccagttcatgcagttcgacgccgacacggtc
ggtgcggccggtgtgcaggcggatgccgaaatgtgcatgatgttcgccgacacgatggaa
gcgctgggcatcaagcgcggcgactacgtgatccgcgtcaacaaccgcaaggttctcgac
ggcgtgctggaggccatcggcctcggcggggaagacaatgccggcgcgcgcctcaccgtg
ctgcgcgccatcgacaagctcgacaagttcggccccgaaggcgtccggctgctgctcggc
gaaggccgcaaggacgaatccggcgacttcaccaagggagcgcgcctcaatgccgaccag
atcgagaaggtgctcttcttcgtcggcatcaaggactatgcgcaaagcgccgccgatctc
gcaaagctcgtcgagggcagcgcgcgcggcagcgagggcgtggaggagctgaaccagatc
ggccatctcgtcacgtccgccggctaccggccggaccgcatcaagatcgatccttccgtc
gtgcgcggcctcgaatattacaccggccccgtcttcgaggccgagctgcaattcgccgtc
accaacgagaagggcgaaaaggtcgtcttcggttccgtcggcggcggcggtcgttatgac
ggtctcgtctcgcgcttcatgggccagccggtgccggccacgggcttttccatcggcgtc
tcgcgcctgatgacggcgctgaagaacctcggcaagctcggccagtccgaggttgtcgcg
cctgtcctcgtcaccgtcatggacggcgatatcgagagcatgggccgctaccagcgcttc
acgcaggaactgcgcgccgccggcatccgcgccgaaatgtatcagggcaactggaagaag
ttcggcaaccagctcaaatatgccgaccgccgcaacgcgcccatcgccatcatccagggc
ggcgacgagcgggccgagggcgttgtccagatcaaggacctcatcgagggcaagcgcctt
tccggcgagatcgaggacaacacgtcctggcgcgaggcgcgcgtggcgcaggtttccgtg
ccggaagccgagtttgtcgcaaaagtccgcgaaatcctcgaggcgcaggccgaagaccgg
gcgcgggccgtctga
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