Shinella zoogloeoides: K8M09_03300
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Entry
K8M09_03300 CDS
T07727
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
szo03009
]
K8M09_03300
Enzymes [BR:
szo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
K8M09_03300
Ribosome biogenesis [BR:
szo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K8M09_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UEX82329
LinkDB
All DBs
Position
678222..680216
Genome browser
AA seq
664 aa
AA seq
DB search
MTFKDKPKRPGGKPSGRDTKPRGAASAAAGKKSFAGGKPEGKKPGGKPFAGKSAPRDDRP
ARAAKPAPAEAASAELAPERISKLLARAGVASRRDIERMIMEGRISVNGKVLETPVVNAT
FADRIEVDGMPVRGIERTRLWLYHKPAGLVTTNADPEGRPTVFDNLPEDLPRVMSIGRLD
INTEGLLLLTNDGGLARMLELPTTGWLRRYRVRAHGKIEQADLDKLKEGIAVDGVLYGAI
DATLDKTQGSNVWLTLGLREGKNREVKNVLGALGLDVNRLIRISYGPFQLGELPEGHAQE
IRGRTLRDQLGPRLIEESKANFDAPLFDHVADEDEKPAKKARSEAPGWGDKPAERREKPG
DRRENARARLDTKRDDRFGDKPRGGPRDRDRDDDRFDSKPKREPATRARKSNVWMAPGAR
PVAEKKAEDAEGVKREPRERPEGAPKSKRYGRTADGALTRSAKKFDPDRKGAARGRPGDD
RADKPRILKTRDEDGEWIRASEPEARDEGRGGFGRNRSGAGDDRAPRGFGDRPPRGDRSF
GDRKPRSEGDRSFGDRKPRSEGDRSFGDRPPRGDRPFGDRKPRAEGERSFGDRPARGDRP
FGGRKPRAEGERSFGDRPPRRDGGKPFGGKPGGKSFGGKPGGRPGGKPGGGRPAGGSRPR
GKGK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaaagacaagccaaaacggccgggcggcaagccctcgggccgcgataccaag
ccgcgtggcgccgcatcggcggccgcgggcaagaaatcttttgccggcggcaagcccgaa
ggcaagaagccgggcggcaagccgttcgccggaaagtccgccccgcgtgacgaccggccg
gcccgcgcggcaaagcccgcgcctgccgaggccgccagcgcggagcttgcgcccgagcgc
atttccaagctgctcgcgcgcgccggcgtcgcctcgcgccgcgatatcgagcgcatgatc
atggaaggccgcatcagcgtgaacggcaaggtgctggagacgccggtggtcaacgccacc
ttcgccgaccgcatcgaggtcgacggcatgccggtgcgcggcatcgagcgcacgcgcctc
tggctctaccacaagccggccggcctcgtgacgacgaatgccgacccggaaggccgcccc
accgtcttcgacaacctgcccgaagacctgccgcgcgtcatgtccatcggccgcctcgac
atcaacaccgaaggcctgctgctgctgaccaatgacggcggcctcgcgcgcatgctggag
ctgccgaccaccggctggctgcgccgctaccgcgtgcgcgcccatggcaagatcgagcag
gccgatctcgacaagctgaaggaaggcatcgccgtcgacggcgtgctctacggcgcgatc
gatgcgaccctcgacaagacgcagggctccaacgtctggctgacgctgggcctgcgcgaa
ggcaagaaccgcgaagtcaagaacgtgctcggcgcgctcggcctcgacgtgaaccgcctg
atccgcatctcctacggcccgttccagctcggcgagctgccggaaggccacgcccaggaa
atccgcggccgcacgctgcgcgaccagctcggcccgcgcctcatcgaggaatccaaggcg
aatttcgacgccccgctcttcgaccatgtggccgacgaggacgagaagcccgcgaagaag
gcgcgcagcgaagcgcccggctggggtgacaagcccgccgagcgccgcgaaaaacccggc
gaccgccgcgagaacgcccgcgcccgcctcgacaccaagcgcgacgaccgcttcggcgac
aagccgcgcggtggcccgcgtgatcgcgaccgcgacgacgaccgtttcgacagcaagccg
aagcgtgagccggcgacccgcgcccgcaagtccaatgtctggatggcccccggcgcgcgt
ccggttgccgagaagaaggcggaagacgccgagggcgtgaagcgcgagccgcgcgaacgt
cccgaaggcgcgcccaagtccaagcgctatggccgcacggccgacggcgcgctgacccgc
tccgcgaagaaattcgacccggaccgcaagggcgccgcacgcggccgtcccggcgacgac
cgggccgacaagccgcgcatcctgaagacgcgcgacgaggacggcgagtggatccgcgcc
tccgagccggaagcccgtgacgaaggtcgcggcgggttcggccgcaaccgctccggcgcc
ggcgacgaccgcgccccgcgcggtttcggtgaccgtccgccgcgcggcgaccgttccttc
ggcgaccgcaagccgcgttcggaaggggatcgttccttcggcgaccgcaagccgcgctcg
gaaggggaccgttccttcggcgaccgtccgccgcgtggagatcgtcccttcggtgatcgc
aagccccgtgcggaaggcgaacgctcgttcggcgaccgtccggcccgtggcgaccgcccc
tttggtggccgcaagcctcgcgcagagggtgaacgctccttcggggatcgtccgccgcgt
cgcgatggcggcaagcctttcggtggcaagcccggcggcaagtccttcggcggcaagccg
ggtgggcgtccgggtggcaagcccggtggcggccgtcccgcaggcggtagccgtccgcgc
ggcaaggggaagtaa
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integrated database retrieval system
