Shinella zoogloeoides: K8M09_03555
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Entry
K8M09_03555 CDS
T07727
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
szo03009
]
K8M09_03555
Enzymes [BR:
szo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
K8M09_03555
Ribosome biogenesis [BR:
szo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K8M09_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
TRAM
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
UEX82378
LinkDB
All DBs
Position
728896..730149
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AA seq
417 aa
AA seq
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MTTETLTIARLGSGGDGIAEAPGGPVYVPFTLPGETVAVARVKNHGTVMSMSVASPERVE
PPCAHFGPDGRNGTCGGCTLQHASDALYHDFKRGLVVNALKSKGLTPDVAPLVIARPGER
RRVAFTARKTEKGMLLGFNQAGSHHIVSVDHCPIASDGIVSRLEDIRRVASAIATSSEAF
RLTVLETATGLDLAFEGVKKVGDRERQAVTACILSLRGIARVSNDGEILIEPVKPEIDFA
GVRVFPPAGGFTQATKPAEEAMADLVLDALGKARRVADLFAGSGTFALRIARKAKVHAVE
GDEKAIKALDHAARNTQGLKPVTAERRDLFRRPLMASELKVYDAVVFDPPRAGAEDQCKE
LARSGVKTIVAVSCNPVSLARDLSILTAAGYRIRLVTPIDQFLWSAHVEAVAVLEKV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggaaaccctcaccatcgcgcggctcggcagcggcggcgacggcatcgccgaa
gcgccgggcggcccggtctacgtgcccttcacgctgcccggcgagacggtcgccgtggcg
cgggtgaagaaccacggcacggtcatgtccatgtcggtcgcctcgcccgagcgcgtggag
ccgccctgcgcccatttcggtcccgatggccgcaacggcacctgcggcggttgcacgctg
caacatgcgagcgatgcgctctatcatgatttcaagcgcggcctcgtcgtcaacgccctc
aagagcaagggcctgacgcccgacgtcgccccgctggtcatcgcccgccccggcgagcgc
cgccgcgtcgccttcaccgcgcgcaagacggaaaagggcatgctgctcggcttcaaccag
gccggcagccaccacatcgtctccgtcgatcactgtcccatcgccagcgacggcatcgtt
tcccggctggaggatatccgccgcgtcgcctcggccatcgcgacgtcgagcgaagccttc
cgcctgacggtgctggaaaccgcgacgggtctcgacctcgccttcgagggcgtgaagaag
gtgggcgacagggagcggcaggccgtcaccgcctgcatcctttcgctgcgcggcatcgcc
cgcgtttccaatgacggggaaatcctcatcgagccggtcaagccggagatcgattttgcc
ggcgtgcgcgtcttcccgccggccggcggcttcacgcaggcgacgaagccggcggaagag
gcgatggcggacctcgttctggacgcgctcggcaaggccaggcgcgtcgccgacctcttc
gccggctccggcaccttcgcgctgcgcatcgcgcgcaaggccaaggtccatgcggtggag
ggcgacgaaaaggcgatcaaggcgctggaccacgccgcgcgcaacacgcagggcctcaag
cccgtgacggcggagcggcgagacctcttccgccgcccgctcatggcctccgaactgaag
gtctacgacgccgtggtcttcgacccgccgcgcgccggcgcggaagaccagtgcaaggaa
ctcgcccgttccggcgtcaagaccatcgtcgccgtctcctgcaacccggtaagcctcgcc
cgcgacctttccatcctcaccgccgccggctaccgcatccgcctcgtcacgcccatcgac
cagtttctctggtcggcccatgtggaagcggtggcggtgctggagaaggtttag
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