Shinella zoogloeoides: K8M09_04280
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Entry
K8M09_04280 CDS
T07727
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szo03400
]
K8M09_04280
DNA repair and recombination proteins [BR:
szo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
K8M09_04280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
FtsK_SpoIIIE
ResIII
AAA_10
AAA_30
T2SSE
AAA_16
TrwB_AAD_bind
DUF5852
Hydrolase
AAA_7
AAA_19
Hydrolase_6
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UEX83610
LinkDB
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Position
complement(867510..869072)
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AA seq
520 aa
AA seq
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MLQDGKLYIGTSRKPDDTNNKPEYLELKFGNRHGLVTGATGTGKTVTLQILAEGFSNAGV
PVFCADVKGDLSGIGAMGEPKDFLQKRADQIGLTPYDFQEFPVIFWDLYGEKGHRVRTTI
SEMGPLLLSRLMNATDAQEGVINIAFKIADQGGLPLLDLKDLQALLNYMGENASALSNQY
GFISKASVGSIQRELLILEQQGAEQFFGEPALKISDIMRTTNDGRGAISVLAADKLMMNP
RLYGTFLLWMLSELFEVLPEVGDPEKPKLVFFFDEAHLLFNDAPKVLIERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVKTAADTFRPNPDFNCAEV
ITQLGTGEALVSTLEGKGAPSMVERTLVRPPVSRLGPVTDAERQDIMKVSPVAGLYDEDF
DRESAYEMLMARAKKAADAAAAQEQAQTEEAQPSSGGSRWTLPGFGDEEPTTPAAPKQAK
PRAGYQRETVAEAAMKSVARTVASSLGRALVRGILGSLRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
attcttcaggacgggaaactctatatcggcaccagccgcaagcccgacgacaccaacaac
aagccggaatatctggagctgaagttcggcaaccgtcacggtctcgtgaccggcgcgacc
ggcaccggcaagacggtgacgctgcaaatcctcgccgaaggtttttccaatgccggcgtt
ccggtgttctgcgccgacgtgaagggcgacctttcgggcatcggcgcgatgggcgagccg
aaggatttcctccagaagcgcgccgaccagatcggcctcaccccttatgatttccaggaa
ttcccggtcatcttctgggacctttacggcgagaagggccaccgcgtccgcaccaccatt
tccgagatggggcccctgctgctctcgcgcctgatgaacgcgacggacgcgcaggaaggc
gtcatcaacatcgccttcaagatcgccgaccagggcggcctgccgctgctcgacctcaag
gacctgcaggcgcttctcaactacatgggcgagaacgcctcggcgctctccaaccagtac
ggcttcatctccaaagcctccgtcggctcgatccagcgcgagctgctgatcctcgagcag
cagggggccgaacagttcttcggcgagccggcgctgaagatttccgacatcatgcgcacc
accaatgacggacgcggcgcgatctcggtgctggccgccgacaagctgatgatgaacccg
cgcctctacggcaccttcctgctctggatgctctcggaactcttcgaggttctgccggaa
gtgggcgacccggaaaagccgaaactcgtcttcttcttcgacgaggcgcacctgctcttc
aacgatgcgccgaaggtgctgatcgagcgcgtggaacaggtcgtgcgccttatccgctcc
aagggcgtcggcgtctatttcgtcacgcagaacccgctcgacgtgccggaaacggtgctc
gcccagctcggcaatcgcgtgcagcacgcattgcgcgcctatacgccgcgcgagcagaag
gctgtaaagaccgccgccgacaccttccgccccaacccggatttcaactgcgccgaggtg
atcacccagctcggcaccggcgaggcgctggtctcgacgctcgaaggcaagggcgcgccc
tccatggtggaacgcacgctggtgcgcccgccggtctcgcgcctcggcccggtcacggat
gccgagcggcaggacatcatgaaggtcagccccgtcgccggcctctatgacgaggacttc
gaccgcgagtcggcctacgagatgctgatggcccgcgccaagaaggccgccgatgctgcc
gctgcgcaggaacaggcgcagaccgaggaggcccagccctcctccggcggcagccgctgg
accctgcccggcttcggcgatgaagaaccgaccacgcccgccgcgccgaagcaggcgaaa
ccgcgtgccggctaccagcgtgaaacggtagcggaagcggcgatgaaatccgtggcgcgc
accgtggcgtcgtcgctcgggcgggcgctggtgcgcgggattctcgggagcttgcggcgg
tag
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