Shinella zoogloeoides: K8M09_04985
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Entry
K8M09_04985 CDS
T07727
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szo03019
]
K8M09_04985 (rnc)
03009 Ribosome biogenesis [BR:
szo03009
]
K8M09_04985 (rnc)
03036 Chromosome and associated proteins [BR:
szo03036
]
K8M09_04985 (rnc)
Enzymes [BR:
szo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K8M09_04985 (rnc)
Messenger RNA biogenesis [BR:
szo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K8M09_04985 (rnc)
Ribosome biogenesis [BR:
szo03009
]
Eukaryotic type
90S particles
RNase
K8M09_04985 (rnc)
Prokaryotic type
rRNA processing factors
K8M09_04985 (rnc)
Chromosome and associated proteins [BR:
szo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K8M09_04985 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UEX82635
LinkDB
All DBs
Position
1005509..1006228
Genome browser
AA seq
239 aa
AA seq
DB search
MKGAIPLNDVNRKALEALIGYVFTDKDRLDRAITHASARPGKGSNYERLEFLGDRVLGLC
VAEMLFRTFREAKEGELSVRLNQLVSAESCAAVSDDLGLHRFIRTGADVKKLTGKAMLNV
RADVVESLIAAIYLDGGLEAARGFILANWEGRAARAEGARRDAKTELQEWAHARFGVTPS
YRVDERSGPDHDPRFTVTVEIRGVKPETGVDRSKRAAEQAAATKILEREGIWPKSQATD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgccattccgctgaacgacgtgaaccgcaaggccctcgaggcgctgatcggc
tacgtcttcaccgacaaggaccgtctcgaccgggcgatcacccatgccagcgcccgaccc
ggcaagggtagcaattacgagcggctggagttcctgggcgaccgcgtgctcggcctttgc
gtggccgagatgctgttccgcaccttccgcgaggcgaaggagggcgagctttccgttcgc
ctcaaccagctcgtcagcgcggaaagctgcgcggcggtatccgacgacctcggcctgcat
cggttcatccgcaccggggccgacgtgaagaagctcaccggaaaagccatgctgaacgtg
cgggccgatgtggtagagtcgctgattgccgcgatctatctcgatggcgggctggaagcg
gcgcgcggcttcatccttgccaactgggagggcagggccgcccgcgcggaaggcgcgcgg
cgcgacgccaagacggaactgcaggaatgggcgcacgcccggttcggcgtgacgccgagt
taccgggtggatgagcgctcgggaccggaccacgatccgcgcttcaccgtgacggtggag
atcaggggcgtgaagccggaaacgggcgtcgaccgctcgaagagggccgccgaacaggcg
gccgcgacgaagattctggaacgcgaaggcatctggcccaagagccaggccacggattga
DBGET
integrated database retrieval system