Shinella zoogloeoides: K8M09_05005
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Entry
K8M09_05005 CDS
T07727
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
K8M09_05005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
DUF460
RNase_II_C_S1
HHH
OB_cyt-4
OB_RRP5_4th
ZapG-like
Motif
Other DBs
NCBI-ProteinID:
UEX82639
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All DBs
Position
1010866..1013175
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AA seq
769 aa
AA seq
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MAPMPLKIANLIAAEIKATSAQVTAAVALIDEGATVPFIARYRKEVTGGLDDTQLRTLSE
RLTYLRELEARRASILDSIAGQGKLTDELAAKIAAVATKAELEDIYLPYKPKRRTKAEIA
RERGLGPLADAILADRAQVPAQLAETFLSAEVADVKAALEGARDIVAEHLTENADLLKRL
REYMKDNAFLRSRVVEGKQEAGAKFSDYFDHTERWANVPGHRALAMLRGWNEEFLSVDIV
VDQDSIEPVKPVERIIASFHAVGTNPGDKWLAEVIGWTWRVKLSMSLSLDLMREMRERSE
EEAIRVFARNLKDLLLAAPAGTRATMGLDPGIRTGVKVAVVDNTGKVVETTTVYPFPPKN
DVRGTQAELASLIRKHKVELIAIGNGTGSRETEKLVADMLDQLPAPKPTKVIVSEAGASV
YSASETAAAEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQGKLSRS
LDAVVEDAVNAVGVDLNTASAPLLARVSGLGKSSAEAIVAHRDANGPFESRKELMKVSRL
GARTFEQCAGFLRIPNGKEPLDASSVHPEAYGVAKKIVAACGRDVRALMGDSAALKQLDP
KVFVDERFGLPTVRDILAELEKPGRDPRPEFRTATFADGIDDIKDLKVGMMLEGTVTNVA
AFGAFVDIGVHQDGLVHVSQLADRFIKDPHEVVKAGDVVKVRVTEVDVPRKRIGLTMRKD
GGAPTARDNAPRNDKNAQMKPKFAQAAPKQQAPSQGAFGAALAEAMKRK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggccccgatgccgctcaagatcgcaaacctgatcgccgccgagatcaaggcgacctcc
gcgcaggttaccgccgccgtggcgctgatcgacgagggcgcgaccgtgcccttcatcgcg
cgctaccgcaaggaggtgacgggcggcctcgacgacacgcagcttcgcacgctctccgag
cggctgacctatctgcgtgaactggaagcccgccgcgcctccatcctcgactccatcgcg
gggcagggcaagctgacggacgaactggccgccaagatcgccgccgtcgccaccaaggcc
gagcttgaggatatctacctgccctacaagcccaagcgccgcaccaaggcggagatcgcc
cgcgagcgcggcctcggcccgctggccgacgcgattcttgcggatcgtgcgcaggttccc
gcgcaactggcggagacattcctgtcggccgaggtggcggacgtgaaggccgcgctggaa
ggcgcgcgcgatatcgtcgccgagcacctgacggaaaacgccgaccttctgaagcgtctg
cgcgaatacatgaaggacaatgctttcctgcgctcccgcgtggtggagggcaagcaggag
gccggcgcgaaattctccgactacttcgaccataccgaacgctgggcgaatgtgcccggc
caccgcgcgctcgccatgctgcgcggctggaacgaggagttcctgtcggtcgatatcgtc
gtcgatcaggacagtatcgagccggtcaagcccgtcgagcgcatcatcgcctccttccat
gccgtcggcacgaacccgggcgacaagtggcttgccgaggtaatcggctggacctggcgc
gtgaaactctccatgtcgctgtcgctcgacctgatgcgcgagatgcgcgagcgttcggaa
gaggaggctatccgcgtcttcgcccgcaacctcaaggacctgctgctcgccgcgcccgcc
ggcacgcgcgccacgatgggcctcgatccgggcatccgcaccggcgtcaaggtggctgtg
gtcgacaataccggcaaggtggtcgagacgacgacggtctatcccttcccgccgaagaac
gacgtgcgcggcacgcaggccgagcttgcctcgctgatccgcaagcacaaggttgagctg
atcgccatcggtaacggcacgggcagccgcgagacggagaagctggtggcagacatgctc
gaccagcttcccgcgccaaagccgacgaaggtcatcgtttcggaggccggcgcttcggtc
tattccgcctcggagaccgcggccgccgaattcccgaacctcgacgtctcgctgcgcggg
gccgtctccatcgcccgccgcctgcaggacccgctggccgaactggtgaagatcgagccg
aagtcgatcggcgtcggccagtaccagcacgacgtcgaccagggcaagctctcgcgctcg
ctggatgccgtggtggaagacgcggtgaacgccgtcggcgtcgatctcaacacggcctcc
gcgccgctgctcgcccgcgtttccggcctcggaaaatcctcggcggaagccatcgtcgcg
caccgcgatgcgaacggcccgttcgagagccgcaaggagctgatgaaggtttcccgcctc
ggcgcacgcaccttcgagcaatgcgccggcttcctgcgcatcccgaatggcaaggaaccg
ctcgatgcttcctctgtccacccggaagcctatggcgtcgccaagaagatcgtcgccgcc
tgcgggcgtgacgtgcgcgccctgatgggcgacagcgcggcgctgaagcaactcgatccg
aaggtcttcgtcgacgagcgcttcggcctgccgaccgtcagggacattctcgccgaactg
gaaaagcccggccgcgacccgcgcccggaattcaggaccgcgaccttcgccgacggcatc
gacgacatcaaggacctcaaggtcggcatgatgctggaaggcacggtgacgaatgtcgcc
gccttcggggccttcgtcgatatcggcgtgcatcaggatggcctcgtgcatgtctcccag
cttgccgaccgtttcatcaaggacccgcatgaggttgtgaaggccggcgacgtggtgaag
gtgcgcgtgacggaagtggacgtgccccgcaagcgcattggcctcaccatgcgcaaggac
ggcggcgcgccgaccgcccgcgacaacgccccgcgcaacgataagaacgcgcagatgaag
ccaaaattcgcccaggccgcccccaagcagcaggcaccctcgcagggggccttcggcgcg
gcgctggccgaggcgatgaagcgcaagtaa
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