Shinella zoogloeoides: K8M09_05510
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Entry
K8M09_05510 CDS
T07727
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K8M09_05510 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
szo01007
]
K8M09_05510 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szo03016
]
K8M09_05510 (aspS)
03029 Mitochondrial biogenesis [BR:
szo03029
]
K8M09_05510 (aspS)
Enzymes [BR:
szo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
K8M09_05510 (aspS)
Amino acid related enzymes [BR:
szo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
K8M09_05510 (aspS)
Transfer RNA biogenesis [BR:
szo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
K8M09_05510 (aspS)
Prokaryotic type
Other AARSs
K8M09_05510 (aspS)
Mitochondrial biogenesis [BR:
szo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
K8M09_05510 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UEX82736
LinkDB
All DBs
Position
1111913..1113700
Genome browser
AA seq
595 aa
AA seq
DB search
MHRYRSHTCAALRKSDVGQTVRLSGWVHRVRDHGGVLFIDLRDHYGITQVVADPDSPAFK
KAETVRGEWVIRIDGLVKARTEDTVNKGMPTGEIELYAQDIEVLSAAKELPLPVFGEPEY
PEDVRLKYRFIDLRRETLHRNIVKRTQIISAMRKGMGEAGFAEYTTPILTASSPEGARDF
LVPSRIHEGKFFALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDVE
MSFVTQEDVWQTMEPMMTAVFEEFAEGKPVTKEWPRIPYDEAIRKYGSDKPDLRNPIVMQ
AVTEHFAGSGFKVFANMIASNPKVEVWAIPAKTGGSRAFCDRMNAWAQSTGQPGLGYIFW
RKEADKLEGAGPLAKNIGEERTEAIRTQLGLDDGDACFFVAGDPAKFYKFAGEARTRAGE
ELNLVDRDRFEMCWIVDFPFYEYNEDEKKIDFAHNPFSMPQGGLEAFDSKDPLELKAYQY
DAVCNGFEIASGSIRNQSPELMVKAFEKVGLSQGDVEERFGGLYRAFQYGAPPHGGCAFG
IDRVVMLLVGAKNLREISLFPMNQQAQDLLMNAPSPATPTQLRELALRVVPSKKD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgttaccgcagccacacctgcgccgctctccgcaagtccgatgtcggccagacc
gtccgtctttccggctgggtccaccgcgttcgagatcacggcggcgtgctcttcatcgac
ctgcgcgaccattacggcatcacccaggtcgtcgccgaccccgattccccggccttcaag
aaggccgagaccgtgcgcggcgaatgggtgatccgcatcgacggcctcgtcaaggcgcgc
accgaagacacggtcaacaagggcatgccgaccggcgagatcgagctttacgcgcaggac
atcgaagtcctgtcggccgccaaggaactgccgctgccggtcttcggcgagccggaatat
ccggaagacgtccgcctcaagtaccgcttcatcgacctgcgccgcgagacgctgcaccgg
aacatcgtcaagcgcacgcagatcatctccgccatgcgcaagggcatgggcgaggccggc
tttgccgaatacaccacgccgatcctcacggcctcctcgccggaaggcgcgcgcgacttc
ctcgtgccgagccgcatccatgaaggcaagttcttcgccctgccgcaggccccgcagcag
tacaagcagctcctgatggtcgccggtttcgaccgctacttccagatcgcgccgtgcttc
cgcgacgaagacccgcgcgccgaccgcctgccgggcgaattctaccagctcgacgtcgag
atgagcttcgtcacccaggaagatgtctggcagacgatggaaccgatgatgacggccgtc
ttcgaggagtttgccgagggcaagcccgtcacgaaagagtggccgcgtattccttacgat
gaagcgatccgcaaatacggctccgacaagccggacctgcgcaaccccatcgtcatgcag
gccgtgactgagcatttcgccggctccggcttcaaggtcttcgccaacatgatcgcgtcg
aacccgaaggtcgaggtctgggcgattccggccaagaccggcggcagccgcgccttctgc
gaccgcatgaacgcctgggcgcagtcgaccggccagcctggcctcggctacatcttctgg
cgcaaggaagccgacaagctggaaggcgcaggcccgctcgccaagaacatcggcgaggag
cgcacggaagccatccgcacgcagctcggcctcgatgacggcgacgcctgcttcttcgtc
gccggcgacccggccaagttctacaagttcgccggcgaagcccgcacccgcgccggcgag
gagctgaacctcgtcgatcgcgaccgcttcgaaatgtgctggatcgtcgacttcccgttc
tacgaatacaacgaagacgaaaagaagatcgacttcgcgcacaaccccttctcgatgccg
cagggcggcctcgaagccttcgacagcaaggatccgctggagctgaaggcctatcagtac
gacgcggtctgcaacggcttcgagatcgcctcgggctcgatccgtaaccagtcgccggaa
ctgatggtgaaggccttcgagaaggtaggcctctcgcagggcgacgtggaagagcgcttc
ggcggcctctaccgcgccttccagtacggtgccccgccgcacggcggctgcgccttcggc
atcgaccgcgtggtcatgctgctcgtcggtgcgaagaacctgcgcgaaatctcgctgttc
ccgatgaaccagcaggcgcaggacctcctgatgaacgccccgtcgccggcaacgccgacg
cagcttcgcgaactggcgctgcgcgtcgttccgtccaagaaggactga
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