Shinella zoogloeoides: K8M09_05580
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Entry
K8M09_05580 CDS
T07727
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00260
Glycine, serine and threonine metabolism
szo00460
Cyanoamino acid metabolism
szo00630
Glyoxylate and dicarboxylate metabolism
szo00670
One carbon pool by folate
szo00680
Methane metabolism
szo01100
Metabolic pathways
szo01110
Biosynthesis of secondary metabolites
szo01120
Microbial metabolism in diverse environments
szo01200
Carbon metabolism
szo01230
Biosynthesis of amino acids
szo01240
Biosynthesis of cofactors
szo04981
Folate transport and metabolism
Module
szo_M00140
C1-unit interconversion, prokaryotes
szo_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K8M09_05580
09102 Energy metabolism
00680 Methane metabolism
K8M09_05580
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K8M09_05580
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K8M09_05580
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K8M09_05580
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K8M09_05580
Enzymes [BR:
szo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K8M09_05580
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UEX82750
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All DBs
Position
1126675..1127973
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AA seq
432 aa
AA seq
DB search
MSQSSATEVFFTRSLADTDPEIFGSIQKELGRQRHEIELIASENIVSRAVLEAQGSIMTN
KYAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPG
DTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDHLLDMDDVAEKARKNKPKLIIA
GGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLR
GPRGGVVLTNDEDIAKKINSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKDYAAQIVKN
AKALAETLKAGGLDIVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPE
KPFVTSGVRLGTPAGTTRGFKEAEFKEIGNLIVEVLDGLKVANSDEGNAGVEAAVREKVV
ALTDRFPMYPYL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcttccgccaccgaagttttcttcacgcgttcccttgccgataccgatccg
gagattttcggctcgatccagaaggaactcggtcgccagcgccatgagatcgaactgatc
gcctcggagaacatcgtctcgcgcgccgtgctcgaagcccagggctcgatcatgacgaac
aagtatgccgaaggctatccgggcaagcgctactatggcggctgccagttcgtcgacatc
gccgaggaactcgccatcgagcgcgccaagaagctgttcggcgtcaacttcgccaacgtt
cagccgaattccggttcgcagatgaaccaggccgtcttcctcgcgctgctgcagccgggc
gacaccttcatgggcctcgacctcaattcgggcggccacctgacgcacggctcgccggtc
aacatgtccggcaagtggttcaacgtcgtttcctacggcgtgcgtgaaggcgatcacctg
ctcgacatggacgacgtcgccgagaaggcccgcaagaacaagccgaagctcatcattgcc
ggcggcaccgcctattcccgcatctgggactggaagcgcttccgcgagatcgccgatgaa
gtcggcgcctatctcatggtcgatatggcgcatatcgccggcctcgtcgccggtggccag
catccgtcgccgttcccgcattgccacgtcgcaaccaccaccacgcacaagtcgctccgc
ggcccgcgcggcggcgtcgtgctgacgaacgacgaggacatcgccaagaagatcaattcg
gccgtcttcccgggcctgcagggcggtccgctcatgcacatcatcgccgccaaggccgtc
gccttcggcgaggcgctgcagccggaattcaaggactatgccgcgcagatcgtcaagaac
gccaaggcgctcgccgagacgctgaaggccggcggcctcgacatcgtttcgggtggcacg
gacaaccacctgatgctcgtcgaccttcgcaagaagaacgcgaccggtaagcgcgcggaa
gccgccctcggccgcgcctatgtcacctgcaacaagaacggcatcccgttcgaccctgaa
aagcccttcgtcacctcgggcgtccgtctcggcacgccggccggcacgacccgtggcttc
aaggaagccgagttcaaggaaatcggtaacctgatcgtcgaggttctcgacggcctgaag
gtcgccaattccgacgaaggcaatgcgggcgtcgaagccgccgttcgggaaaaggtcgtc
gcgctgacggaccgcttcccgatgtacccctacctgtaa
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