Shinella zoogloeoides: K8M09_06135
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Entry
K8M09_06135 CDS
T07727
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
szo
Shinella zoogloeoides
Pathway
szo02024
Quorum sensing
szo03060
Protein export
szo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K8M09_06135 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K8M09_06135 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8M09_06135 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
szo02044
]
K8M09_06135 (secD)
Secretion system [BR:
szo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K8M09_06135 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
UEX82858
LinkDB
All DBs
Position
1224688..1227225
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AA seq
845 aa
AA seq
DB search
MKTSKWALFVSAAIILFGMLAAVPNVLTPEQQARFGRYLPANPVTLGLDLKGGSHLVLEV
DSAALRKARMDTLLNDTRAILRTAGERASAARLSGTTLTITLPDQAAFDKVLPEVRKLAA
PTSTLGFGAGSSDIDVATNDLVINVTLTEAGVNERMSAAVEQSLEIIRRRVDQVGVAEPL
IQRVGGDRILVQLPGLQDPTRLRQLLGSTAQMSFHMVDQTVDPNGVAPRGVMILPGANDN
NKYAVEERVAISGDRLSDAKAGFDQRTSEPIVSFSFDSTGARQFAEITQANVGKPFAIVL
DGKVLTAPVIREPIIGGQGQISGNFNPQEATVLSALLRSGALPAPLTIIEERTVGPNLGS
DSIRMGLYTGLAGLAAVVVLMQVLYGSWGIIANLGLVLHTILTIGLLGLLGSTLTLPGIA
GIILGIGMAVDANILINARIREETAGGAGAMKALDVGFNKAYATIVDGNMTTMVGMILLF
MFGSGPVRGFAITMIIGLAISMFTSITFVRFLMREAVIVRKMKKIEIHSLFGKVWEIPTF
SFMRGRYIAIAMSAFISTSSIILFFTPGLNYGIDFVGGIQVEATSKTPIDLAPLRTKMEE
LNLGEVALQEFGQGTSVLVRVQRQPGGEEVQTAALQKIRDGVAEVIPDANFERTEVVGPT
VSTELARSGFLAVGLGMLAILIYIWWRFEWHFAVGAIATLILDITKMIGFFSLMQIDFNL
TAIAAVLTLIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDLSINQVVMRCIFTSLAVAV
SLLPMAIWGGDTVKPFAWPMLFGVIVATTSSIYIGGPILLFLNRFWKDREGSRAPGSAGT
PAAES
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctccaaatgggcattgttcgtctccgccgccatcatcctcttcgggatgctc
gcggccgtgccgaacgtgctgacgcctgaacagcaggcgcgattcgggcgctacctgccc
gctaaccccgtcaccctcggcctcgacctgaagggcggctcgcatctcgttctggaggtg
gattccgccgcgctccgcaaggcgcgcatggacacgctgctcaacgatacgcgcgccatc
ctgcgcacggccggcgagcgcgcctccgccgcgcgcctgagcggtacgacgctgacgatc
acactgccggaccaggccgccttcgacaaggtcctgccggaagtgcgcaagctggccgcg
ccgacctcgaccctcggtttcggcgccggttcgtccgatatcgacgtcgcgaccaatgac
ctcgtcatcaacgtcacgctgacggaagcgggcgtcaacgagcgcatgtcggccgccgtc
gagcagagcctcgagatcatccgtcgccgcgtcgaccaggtcggcgttgccgaaccgctc
atccagcgcgtcggcggcgaccgcatcctcgtccagcttccgggcctgcaggacccgacg
cgcctgcgtcagctcctcggctcgaccgcgcagatgagcttccacatggtcgaccagacc
gtggacccgaacggcgtcgccccgcgcggcgtgatgatcctgccgggcgccaacgacaac
aacaaatatgccgtcgaagagcgcgtcgccatttccggcgaccgtctttccgacgccaag
gcgggctttgaccagcgcacgagcgagccgatcgtctcgttcagcttcgattccaccggc
gcgcgccagttcgcggaaatcacgcaggccaatgtcggaaaacccttcgccatcgtcctc
gacggcaaggtgctgacggcgccggtcatccgcgagccgatcatcggcggccagggccag
atctcgggcaacttcaacccgcaggaagcgaccgtgctttcggcgctgctgcgctccggc
gcgctgccggccccgctcaccatcatcgaggagcgcaccgtcggcccgaatctcggttcg
gactcgatccgcatgggcctctatacgggtcttgccggccttgccgccgtcgtggtgctg
atgcaggtgctctacggctcctggggcatcatcgccaatctcggcctcgtgctgcacacg
atcctgaccatcggcctgctcggcctgctcggctcgacgctgaccctgcccgggattgcc
ggtatcatcctcggcatcggcatggcggtggacgccaacatcctgatcaacgcccgtatc
cgtgaagagacggcgggtggggcaggggccatgaaggcgctcgatgtcggcttcaacaag
gcctatgccaccatcgtcgacggcaacatgacgaccatggtcggcatgatcctgctgttc
atgttcggctcgggtccggtgcgcggcttcgccatcaccatgatcatcggccttgcgatc
tcgatgttcacctcgatcaccttcgtgcgcttcctgatgcgcgaggcggtcatcgtgcgc
aagatgaagaagatcgagattcactcgctcttcggcaaggtctgggaaatcccgaccttc
tccttcatgcgcggccgctatatcgcaatcgccatgtcggccttcatctcgacgagctcg
atcatcctgttcttcacgccgggcctcaactacggcatcgacttcgtcggcggtatccag
gtggaagcgacgtccaagacgcccatcgacctcgcgccgctgcgcacgaagatggaagag
ctgaacctcggcgaagtggcgctgcaggaattcggccagggcacgtcggtcctcgttcgc
gtccagcgccagccgggcggcgaagaggtgcagaccgcagcgctccagaagatccgcgac
ggcgttgccgaagtgatcccggacgccaatttcgagcgtacggaagtggtcggcccgacg
gtcagcaccgagcttgcccgctccggcttcctcgccgtcggcctcggcatgctcgccatc
ctgatctacatctggtggcgcttcgaatggcacttcgccgtgggggccatcgcgacgctg
atcctcgacatcaccaagatgatcggcttcttctcgctgatgcagatcgacttcaacctg
acggccatcgccgccgtgctgacgctgatcggctactcggtgaacgacaaggtggtggtg
tacgaccgcatgcgcgagaacctgcgcaagtacaagtcgatgcccttctcggacctcatc
gacctgtcgatcaaccaggtggtcatgcgatgcatcttcacctcactcgccgtcgcggtc
tcgctgctgccgatggcgatctggggtggcgatacggtcaagcccttcgcctggccgatg
ctgttcggcgtcatcgtcgcgacgacctcgtcgatctatatcggcggcccgatcctgctg
ttcctcaaccgcttctggaaggaccgcgaaggctcgcgggcgcccggttcggccggaacg
ccggctgcggaaagctga
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