Shinella zoogloeoides: K8M09_07170
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Entry
K8M09_07170 CDS
T07727
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
szo
Shinella zoogloeoides
Pathway
szo02024
Quorum sensing
szo03060
Protein export
szo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K8M09_07170 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K8M09_07170 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8M09_07170 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
szo02044
]
K8M09_07170 (secD)
Secretion system [BR:
szo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K8M09_07170 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UEX83045
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Position
1419230..1421737
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AA seq
835 aa
AA seq
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MQQSARWKTVSFWLVLVASLVVILPSLLPAGMAAGLPGWMGAHRLVPGLDLTGGSRLVLE
VSRADITEERLRAGVGTIGDALRAAGVAYSDLNGSEDAIDVTVTAPDRIDAARQTLTGLG
LGALSEPENGQFRIVLPSEAIDEAVGAASLGAVDAVRRRVESLDIPSLLVSRGERDRIVV
SMPGLTDPQRVKDMLAQVGRLSARLVDDSMPVNTAIEDGPPEGSEVLYSTGEPPVGYLVK
RADLFTAVDVASAQPAANGEAFIEFVLKGEAAERLAAFTQENSGRTVAILLDDQVISTSQ
IQGAIVDGVGRLSGDFDAEGAANIARIVASGPLPAPLTIIEERSIEPALGTTSVGTVVLA
LAAAVAAVVAFMTIFYGVLGVIASLSLFFNVLVTFAVLALVGAPISLSMIAGVVLTVGVT
VDASVLIFERIREEVRNGRSLADAVAIGFGRARRTVVDASVTMLIAVAVLLVLSAAPVRA
FALTVAIGLLATLFTTFTLTRGLVRAWLGRSHATHLPKGVRTGVFDRLNLRFMAVRNVVF
LVTAALSLVIAGLLVLGELRLGIDFTGGAAVEIQAKSGTADLFDISARLADAGIDVQSID
THGNDRRALVRLSSMGEGENAEQTSVLVARGELEDAYDFRRVEVVGPAISGELIDTATIG
FVAGLLALVAYIWIRFEWHFAIGAVIALAHDVFFTLGFLAIADIEFNVSAVAALLTVAGY
SLNDTMVVYHRIRENLRHFKHMPLPILIDDAINRTLSRTVLTSATTLIALAALALFGGEA
IRTFALTLLFGVAIGTLSSIYIAGPVLILFRLRPEHYRPGKGGKGPVAEATGANG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatccgcccgctggaagaccgtttctttctggctcgtccttgtggcgagcctt
gtcgtcatcctgccgagcctgttgccggcaggcatggctgccggccttcccggatggatg
ggcgcgcatcgcctcgtccccggcctcgacctgaccggcggctctcgactcgttcttgaa
gtttcacgcgcggatattaccgaagagcggctgcgtgccggcgttggaaccatcggcgac
gcgcttcgtgccgcgggcgttgcctatagcgatctcaacggttcggaagacgccatcgac
gtgaccgtgacggcgcccgatcgcatcgatgcggcgcgccagacgctcacgggcctcggc
cttggtgctctcagcgaaccggagaacggccagttccgcatcgtcctgccctccgaggcc
atcgacgaggcggtcggcgccgcttccctgggtgcggtggatgcggtgcgtcgccgcgtc
gaaagcctcgatatcccgtcccttctggtgtcgcgcggcgagcgcgaccgcatcgtggtc
tccatgccggggctgaccgatccgcagcgtgtcaaggacatgctggcgcaggtcggccgg
ctctccgcccggctggtcgatgacagcatgcccgtcaacaccgcgatagaagacggcccg
ccggaaggctccgaagtgctctattccaccggcgaacccccggtcggctatctggtgaag
cgcgcagacctcttcaccgccgtcgacgtggcctcggcgcagcccgcggccaatggcgaa
gccttcatcgaattcgtgctcaagggagaggcggccgagcggcttgcggccttcacgcag
gaaaacagcgggcgaaccgtcgccatcctgctcgacgatcaggtcatctccacctcgcag
atacagggtgccatcgtcgatggcgtcggcaggctttccggcgatttcgatgccgagggc
gcggcgaatatcgcgcgcatcgtcgcgagcgggccgttgcccgcgccgctcaccatcatc
gaggaacgttccatcgagccggcgctcggcacgacctcggtcggaacggtcgtgcttgcg
cttgccgccgccgtcgcggcggtcgtcgccttcatgacgatcttctacggcgtgctcggc
gtcatcgcctcgctctcgctgttcttcaacgtgctggtgaccttcgccgttctggcgctc
gtcggcgcgccgatctcgctctccatgatcgccggcgtggtgctgaccgtcggtgtcacg
gtcgatgccagcgtgctgatcttcgagcgtatccgcgaggaggtcaggaacggccgctcg
ctagccgacgccgttgccatcggcttcggccgggcgcgcaggacggtcgtcgatgcgtcc
gtcaccatgctgatcgccgttgcggttctcctcgtcctgtccgccgcgcccgtgcgcgcc
ttcgcgctcaccgtcgccatcggcctgcttgcgacgctcttcacgaccttcacgctgacg
cggggcctcgtgcgtgcctggctcggtcgcagccacgcgacccatctgccgaagggcgtg
cgcaccggcgtcttcgaccggctcaacctgcgtttcatggcggtgcgcaatgtggtgttc
ctggtgacggcggcgctgtcgctcgtcatcgccggcctgctggtactcggcgaactgcgt
ctcggcatcgatttcaccggcggggcggcggtggagattcaggccaagtccggcaccgcg
gatctcttcgatatctccgcgcgccttgcggatgccggcatcgatgtgcagagcatcgac
acccacggcaacgaccgccgcgcgctggtgcgcctgtcctcgatgggcgagggcgagaat
gccgagcagacctccgtcctcgtcgcgcgcggcgagcttgaggatgcctacgacttccgc
cgcgtcgaggtggtcggcccggccatttcgggcgaattgatcgataccgcgaccatcggc
ttcgtcgccggccttctcgcgctcgtcgcctatatctggatccgcttcgaatggcacttc
gccataggtgcggtcatcgcgctggcgcatgacgtgttcttcacgctcggcttccttgcc
atcgccgatatcgaattcaatgtcagcgccgtcgcagcgctcctgacggttgccggctat
tcgctgaacgatacgatggtcgtctatcatcgcatccgcgagaatctgcggcatttcaag
catatgccgctgccgatcctcatcgacgacgcgatcaaccgcacgctctcgcgcacggtc
ctgacctcggcgacgacgctgatcgcgctggccgcgctcgcgctcttcggcggcgaggcg
atccgcaccttcgcgctgacgctgctcttcggggtggcgatcggcactctttcctctatc
tacattgccgggccggtcctcatcctgttccgccttcggccggaacactaccgtcccggc
aagggcggcaagggaccggttgcggaagcgacgggagccaatggctaa
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