KEGG   Shinella zoogloeoides: K8M09_08065
Entry
K8M09_08065       CDS       T07727                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
szo  Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:szo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:szo03032]
    K8M09_08065 (gyrA)
   03400 DNA repair and recombination proteins [BR:szo03400]
    K8M09_08065 (gyrA)
Enzymes [BR:szo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     K8M09_08065 (gyrA)
DNA replication proteins [BR:szo03032]
 Prokaryotic type
  DNA Topoisomerases
   K8M09_08065 (gyrA)
DNA repair and recombination proteins [BR:szo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      K8M09_08065 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C CAP18_C Seryl_tRNA_N
Other DBs
NCBI-ProteinID: UEX83211
LinkDB
Position
1597892..1600672
AA seq 926 aa
MTEQSTPGGKNPPGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMS
EMGVDWNKKYVKSARVTGDVMGKYHPHGDAAIYDALARMAQDWSLRLPLIDGQGNFGSVD
GDPPAAQRYTECRLEKAAHSLLDDLDKETVNFRDNYDGTMSEPVVVPAKFPNLLVNGAGG
IAVGMATNIPPHNLTEVINGCIALIDNPAIELLDLMQHIPGPDFPTGALILGRAGIRQAY
ETGRGSVVMRGRAHIEPMRGDREQIIVTEIPYQVNKATMIEKMAELVRDKRIEGISDLRD
ESDRDGYRVVIELKRDANADVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAF
VAFREEVVSRRTKYLLRKARDRAHVLVGLAIAVANIDEVINLIRRAPDPQTAREQLMERR
WPAKDVDALIRLIDDPRHRINEDLTYNLSEEQARAILELRLARLTALGRDEIDEELNKIG
EEIKDYLDILSSRSRMMNIVKDELAAVRDEFGTPRRTEIAEGGPDMDDEDLIAREDMVVT
VSHAGYVKRVPLATYRAQRRGGKGRSGMAMKDEDFATRLFVANTHTPVLFFSSRGIVYKE
KVWRLPIGTPQSKGKALINMLPIEPGERITTIMPLPEDETTWENLDVMFTTTRGTVRRNK
LSDFVQVNRNGKIAMKLEEEGDEILNVETCTERDDVLLTTALGQCIRFPVDDVRVFAGRN
SVGVRGITMGNGDRIISMTIVKHVDAEPWERAAYLKRSAAERRASGVDEEDIALVGEEVG
EVGDLPDERYQILKEQEQFVLTVSQKGYGKRSSSYDFRTSGRGGKGIRATDTSKTGEIGE
LVAAFPVEEKDQLMLVSDGGQLIRVPVDGIRIASRATKGVTIFSTAKDEKVVSVERISEP
EGDDDAESADIEGDIEAGDAAPAAEE
NT seq 2781 nt   +upstreamnt  +downstreamnt
ttgacagaacaatcgacacccggcggcaagaaccctcccggcattgagccgatctccatc
atcgaggaaatgcagcggtcctatctcgattacgccatgagcgtgatcgtgtcccgcgcg
ctgcccgatgtgcgcgacggtctgaagcccgttcaccggcgcatcctctactcgatgagc
gagatgggcgtcgactggaacaagaaatacgtgaagtcggcccgcgtgaccggtgacgtg
atgggtaaataccatccgcacggcgacgccgcgatctacgacgccttggcgcgcatggcg
caggactggtcgctccgcctgccgctgatcgacggccagggcaacttcggctccgtcgac
ggcgacccgccggccgcccagcgttacacggaatgccgcctggaaaaggccgcccactcg
ctgctcgacgacctcgacaaggaaacggtcaacttccgcgacaactacgacggcacgatg
agcgagccggtcgtcgtgccggcaaaattcccgaacctgctcgtcaacggcgcgggcggc
atcgccgtcggcatggcgacgaacattccgccacacaacctcaccgaggtcatcaacggc
tgtatcgcgctgatcgacaatccggcgatcgagcttctcgacctgatgcagcatattccc
ggccccgatttcccgaccggcgcgctgatcctcggccgcgccggcatccgccaggcctat
gagaccggccgcggctcggtcgtcatgcgcggccgcgcccatatcgagccgatgcgcggc
gaccgcgagcagatcatcgtcaccgaaattccctatcaggtgaacaaggcgacgatgatc
gagaagatggccgagttggtgcgcgacaagcgcatcgagggcatctcggacctgcgcgac
gaatccgaccgcgacggctaccgcgtcgtcatcgaactgaagcgcgacgccaatgccgat
gtcatcctgaaccagctctaccgctacacgccgctgcagacctccttcggctgcaacatg
gtggcgctgaacggcggcaagccggagcagatgacgctgctcgacatgctgcgcgccttc
gtcgccttccgcgaggaagtcgtcagccgccgcacgaaatacctgctgcgcaaggcgcgc
gaccgcgcccatgtcttggtcggtcttgccatcgccgtcgccaatatcgacgaggtgatc
aacctcattcgccgcgcgcccgatccgcagacggcgcgcgagcagttgatggaacgccgc
tggccggccaaggacgtcgacgcgctgatccgcctcatcgacgatccgcgccaccgcatc
aacgaggacctcacctacaatctctccgaggagcaggcccgcgccatcctcgaactgcgc
cttgcccgcctcacggcgctcggccgcgacgagatcgacgaggaactcaacaagatcggc
gaggaaatcaaggattacctcgatatcctctcctcgcgttcgcgcatgatgaatatcgtc
aaggacgagcttgccgccgtgcgcgacgagttcggcacgccgcgccgcaccgagatcgcc
gagggcggtccggacatggacgacgaagacctcatcgcccgcgaggacatggtcgtgacc
gtgtcgcatgccggttacgtcaagcgcgtgccgctcgccacctatcgcgcgcagcgtcgt
ggcggcaagggccgctccggcatggccatgaaggacgaggatttcgcgacacgccttttc
gtcgccaacacgcatacgccggttctgttcttctcctcgcgcggcatcgtctacaaggag
aaggtctggcgcctgccgatcggcaccccgcagtcgaagggcaaggccctcatcaacatg
ctgccgatcgagccgggcgaacgcatcaccaccatcatgccgctgcccgaggacgagacg
acgtgggaaaacctcgacgtcatgttcacgacgacccgcggcacggttcgccgcaacaag
ctgtcggacttcgtccaggtcaaccgcaacggcaagatcgcgatgaagctcgaggaagag
ggcgacgagatcctcaacgtcgagacctgcacggaacgcgacgacgtgctgctgacgacg
gcgctcggccagtgcatccgcttcccggtcgatgacgtgcgcgtcttcgccggccgcaac
tcggtcggcgtgcgcggcatcacgatgggcaacggcgaccgcatcatctcgatgaccatc
gtcaagcatgtcgatgccgagccgtgggaacgcgccgcctacctgaagcgctccgccgcc
gaacgccgcgccagcggcgtcgacgaggaggatatcgcgctggtcggcgaggaagtcggc
gaagtcggtgatcttcccgatgagcgctaccagatcctcaaggagcaggagcagttcgtg
ctcacggtctcgcagaagggctacggcaagcgctcgtcctcctatgacttccgcacctcc
ggccgcggcggcaagggcatccgcgccaccgacacgtccaagacgggcgagatcggcgaa
ctggtcgccgccttcccggtcgaggagaaggaccagctcatgctcgtctccgacggcggt
cagctcattcgcgtgccggtcgatggcatccgcatcgccagccgcgccacgaagggcgtg
acgatcttctccaccgccaaggacgagaaggtggtttcagtcgagcgcatcagcgagccg
gaaggcgacgatgacgcggaatcggcggacatcgaaggcgatatcgaagccggggacgcc
gcaccggccgcagaggaatag

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