Shinella zoogloeoides: K8M09_08185
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Entry
K8M09_08185 CDS
T07727
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00550
Peptidoglycan biosynthesis
szo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K8M09_08185
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
szo01002
]
K8M09_08185
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
K8M09_08185
Enzymes [BR:
szo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K8M09_08185
Peptidases and inhibitors [BR:
szo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
K8M09_08185
Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
K8M09_08185
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SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
UEX83233
LinkDB
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Position
complement(1620069..1621235)
Genome browser
AA seq
388 aa
AA seq
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MHRRLVACLVLFLSFLTVAGAQTASPQQGGFDVKARQVYLIEAETGTVLFARGEDDVVPA
ASLAKLMTAATVFKALSAGDVTLDTTYPVTEHAWRTGGAPSGTSTMFAALKSNVRVEDLI
RGITVQFANDACIILGEGMTGSEAAFAERMTKEARALGLEKSTFANATGLPNPANKVTMR
EMVTLARHLETTYPQYMRYYIEPEFEWNKIKQRNRNPLLALNLGVTGFVTGFAEESGYSI
VAAVNRDGKHLVLAMAGMESDKARIEETRRIIEWALSSFERRTLFKAGEVIADASVYGGD
ASTVPLVAGEQVDVFLPKDNSQRLVARVVYIWPVRAPVKPEQTVGALRIWNDKQLLREVP
VRTAGSVGEGTLRSRALDALIELFFFWI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgccgcctagttgcctgccttgtccttttcctgtccttcctcaccgtcgccggg
gcccagacggcatcgccccagcagggcggcttcgacgtcaaggcgcggcaggtctatctg
atcgaggcggaaaccggcacggtgcttttcgcgcgcggagaagacgatgtcgttcccgcc
gcctcgctcgccaagctgatgacggcggcgacggtgttcaaggcgctttccgccggagac
gtcacactcgacacgacctatcccgtgaccgaacatgcctggcgcaccggcggcgcgccg
tcgggcacctccaccatgttcgcggcgctcaagtcgaacgtgcgcgtcgaggacctgatc
cgtggcatcacggtgcagttcgccaacgatgcctgcatcatcctcggcgagggcatgacc
ggctccgaggcggcctttgccgagcggatgacgaaggaggcgagggcgctcgggctggag
aaatcgaccttcgccaatgccaccggcctgccgaacccggccaacaaggtgacgatgcgc
gaaatggtgacgctcgcccgccatctggagaccacctatccgcaatatatgcgctactat
atcgagccggaattcgagtggaacaagatcaagcagcgcaaccgcaacccgctgctggcg
ctcaatctcggcgtgacgggcttcgtgaccggctttgcggaagagagcggctattccatc
gtcgcggccgtgaaccgcgacggcaagcatctggtgctcgctatggcgggcatggagagc
gacaaggcgcgcatcgaggaaacccgccggatcattgaatgggcgctttccagcttcgag
cgccggacgctcttcaaggccggcgaggtcatcgcggatgccagcgtctatggtggcgac
gcctcgaccgtgccgctggtggcgggcgagcaggtggatgtgttcctgccgaaggacaat
tcgcagcggctcgtcgcccgtgtcgtctacatctggcctgtgcgcgcgccggtgaagccg
gagcagacggtcggtgcgctgaggatatggaacgacaagcagctcctgcgcgaggtgccg
gtgcgcaccgccggcagcgtgggcgaggggacgttgcgctcgcgggcgctggatgccctg
atcgaactgttcttcttctggatctga
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