Shinella zoogloeoides: K8M09_08190
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Entry
K8M09_08190 CDS
T07727
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
K8M09_08190
Enzymes [BR:
szo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K8M09_08190
Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K8M09_08190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
UEX83234
LinkDB
All DBs
Position
complement(1621339..1622340)
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AA seq
333 aa
AA seq
DB search
MKTNASRFGKGLRLIAIPLICAGLAACATTTAAPKKKARSKEFFAESEYGVKASPRVVED
GQPVPKGGGRYQLGKAYQVRGKWYRPKEEMGYSKTGLASWYGAAFHGRKTANGEVYDRYH
LSAAHPTFPLPSYARVTNLENGTSVIVRVNDRGPFHENRLIDVSSKTADLLDMKRTGTAK
VRVQYVGKAPLEGNDMPYLMASYVTKGSRVPAVDPGGQIATGVMVASADSNALPDSGQGE
GYLKVPEQSAMTALAKTAPVSDAFQAMEQFALLPEIGPMPVERPNFVPLPSSGSSYAAAY
ADERVRDASGAFDAILTMDGQLTPLSALADNAG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgaatgcgagccgtttcggcaagggcctgcggcttatcgcgattccgctgatc
tgcgctggcctggccgcctgcgcaacgacgacggcggcacccaagaaaaaggcccgcagc
aaggaattcttcgccgagtcggaatatggcgtcaaggccagcccgcgcgtcgtcgaggac
ggccagcccgtgccgaagggcggcgggcgctatcagctcggcaaggcctatcaggtccgc
ggcaagtggtatcgtccgaaggaagagatgggctacagcaagaccggccttgcttcctgg
tacggcgcggccttccacggccgcaagacggcgaacggggaggtctacgaccgctatcac
ctctcggcggcgcatccgacattcccgctgccgagctatgcgcgcgtcaccaatctggaa
aacggcacctccgtcatcgtccgcgtcaacgaccgcggcccgttccatgaaaaccgcctg
atcgacgtttcctccaagaccgccgacctgctggacatgaagcgcaccggcacggccaag
gtgcgcgtgcaatatgtcggcaaggcgccgctcgagggcaacgacatgccctatctcatg
gcgtcctatgtcaccaaggggtcgcgcgttccggcggtcgatccgggcggccagatcgcg
accggcgtcatggtcgcttccgcagacagcaacgcactgccggattccgggcagggcgag
ggctacctgaaggtgcccgaacagagcgcgatgacggcgctggccaagaccgcgccggtc
tccgacgccttccaggccatggagcagttcgctctcctgccggaaatcggtccgatgccg
gttgagcggccgaatttcgttccgctgccgtcctccggctccagctatgccgcagcctat
gcggacgagcgggtgcgcgacgcctcgggcgccttcgacgccatcctgacgatggacggg
caattgacgccgctttccgcgctcgccgacaatgcgggttga
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