Shinella zoogloeoides: K8M09_09160
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Entry
K8M09_09160 CDS
T07727
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
szo01002
]
K8M09_09160
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
K8M09_09160
Peptidases and inhibitors [BR:
szo01002
]
Cysteine peptidases
Family C82
K8M09_09160
Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
K8M09_09160
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UEX83414
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All DBs
Position
complement(1818662..1820542)
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AA seq
626 aa
AA seq
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MKLTKTAVLAAALAVSCAAITLPAAPANAITLMDILRGGKKKEPVREPLPGVDGGVSLPN
ATVKQEAKPLPRVTGPRYYTYKADALKRVAVDKLADPVVTSSISTDVAPAGDAGIRAAFA
TVEVRTTPDAAKAVETFYGDYKKLVWIDGTGISEKAKTAIAVLADAASVGLDPWDYAVQI
PSDSFDSADMNKRYSELATFEVALSSAVATYIQDAVRGRIDPNRISGYHDFKRKDVNLVG
ALKNVVLSGNIRNYLESRSPLNDDFRLLKAELAKRRAETGGDDRVVIAEGTLLKPGESNP
ELANIVKGVVKHGSDALKTDHSVAIATYKGTPEYTPELVALVEAFQKENGLKPDGVVGKA
SIRKLVGGDSVADKVAKLEVALEQARWLPVDLGARHVFINQPAFMVYYHEDGREKFSMRT
VVGSKSNQTYFFEDRVQTVEVNPYWGVPQSIIINEMLPKLRNDPSYLDRMGYEVAVGGRA
VPSSSVNWHGSTAGVSVRQPPSGDNALGELKILFPNSHAIYMHDTPSKSFFKKDMRALSH
GCVRLAEPRKMAAAVLGISEADVGKEIAAGGNRALPVKADIPIYITYFTAWPNKDGAVEY
FDDVYGRDDYMRKAFDATRAARQAQG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacaaagactgccgtgctggccgccgcgctggccgtttcctgcgccgccatc
acgctgcctgccgcgcccgccaacgccatcacgctgatggacatcctgcgcggcggcaag
aagaaggagccggtgcgcgagccgcttcccggcgtggacggcggcgtttcgctgccgaac
gccacggtgaagcaggaggccaagcccctgccgcgcgtcaccggcccgcgctactatacc
tacaaggccgatgcgctgaagcgcgtcgccgtcgacaagctggccgatcctgtcgtgacc
agctcgatttccaccgatgtcgcgccggcgggcgatgccggcatccgcgccgctttcgcc
acggtggaggtgcgtactacgccggacgccgccaaggcggtcgagacgttctacggcgat
tacaagaagctcgtctggatcgacggcacgggcatcagcgagaaggcgaagaccgccatc
gcggtgctcgccgatgccgcatccgtcggcctcgatccgtgggactatgcggtgcagatt
ccgtcggacagcttcgacagcgccgacatgaacaagcgctacagcgaactggccaccttc
gaggtcgccctgtcctccgccgttgcgacctatatccaggacgcggttcgcggccgcatc
gatccgaaccggatttccggctatcacgatttcaagcgcaaggacgtcaacctcgtcgga
gcgctgaagaacgtcgtgctcagcggcaacatccggaactatctggaaagccgttcgccg
ttgaacgacgatttccgcctgctgaaggccgagcttgcgaagcggcgggccgagaccggc
ggcgacgatcgcgtggtcattgccgagggcacgctgctcaagcccggcgagagcaacccg
gaactcgccaacatcgtcaagggtgtcgtcaagcatggttcggatgcgctgaagaccgat
cattcggtggccatcgccacctacaagggcacgccggaatatacgcccgagctggtcgcc
ctcgtcgaggccttccagaaagagaacggcctgaagccggacggcgtcgtcggcaaggcc
tcgatccgcaagctggtcggcggcgattccgttgccgacaaggtcgccaagctcgaagtg
gcgctggaacaggcgcgctggctgccggtcgatctcggcgcgcgccacgtcttcatcaac
cagccagccttcatggtctattaccatgaggacgggcgcgagaaattctcgatgcgcacg
gtcgtcggctccaagtcgaaccagacctatttcttcgaggaccgcgtgcagaccgtcgag
gtcaacccgtattggggcgtgccgcagtcgatcatcatcaacgagatgctgccgaagctg
cgtaacgacccgtcctatctcgaccgcatgggctatgaagtggctgtcggcgggcgggcg
gtgccgtcctcctcggtcaactggcacggctccacggcgggcgtttccgtgcgccagccg
ccgagcggcgacaatgcgctgggcgaattgaagatcctcttccccaattcgcacgccatc
tacatgcacgacacgccttcgaagagcttcttcaagaaggacatgcgggcgctgagccat
ggctgcgtgcgccttgccgagccgcgcaagatggcggcggcggtgctgggcatcagcgag
gcggatgtcggcaaggagatcgcggccggcggcaacagggcgctgcccgtgaaggccgat
atcccgatctacatcacctatttcacggcatggccgaacaaggacggcgcggtcgagtat
ttcgacgacgtctatggccgcgacgactacatgcgcaaggcgttcgacgccacgcgcgcg
gcgcggcaggcgcagggctga
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