Shinella zoogloeoides: K8M09_09920
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Entry
K8M09_09920 CDS
T07727
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
szo02000
]
K8M09_09920
Transporters [BR:
szo02000
]
Other transporters
Pores ion channels [TC:
1
]
K8M09_09920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UEX83556
LinkDB
All DBs
Position
complement(1971466..1972947)
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AA seq
493 aa
AA seq
DB search
MRSSNGWFLSRDFSPNAVENGGRRDFSDVEDWRGNIKVGITPNDTDEYVVSYTRQEGEKN
APYAINQGVIGRTPSKIFGIGTDWQRNWTWPQWDIGSLSFNSNTAIGEDSYVKVKAFYNT
FDNLLSSYDDSTFTTQQEKRAFDSYYDDHAYGLSVEAGTEFESNSLKAALHYRRDSHTEW
NDNRPDHPTSRLLEPRQTQVEDGLAFALENTYHITDTLDLVAGASYEKTTLKRAEEYDKN
TSAVFSYPLGGSDSLNWQTAAIWRPTAVTELHASVSSRTRFPNMFERFSTRFDTALPNPD
LGPERAVNFEVGGETELTDTWRGSGALFYSDVKDVIQSVGVNATTGQNQNVGDGRYYGFE
LTTEWDATEELTVGGNYTYLKREITDALLPNLRSTGVPEHLFFAHATWNPTEKLSVTGSL
EASSSRWSDNPVKNGPYIETGGFALANLNFEYKFTEAHSASFGVRNLFDRNYELVTGFPE
AGRTFYLNARATF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgcgctccagcaatggctggttcctctctcgtgatttcagccccaacgccgttgaaaat
ggggggcgtcgcgatttcagcgacgtcgaggattggcgcgggaatatcaaggtcggcatt
acgccgaacgacacggatgaatatgtcgtcagctatacgcggcaggagggggagaagaat
gcgccttacgcgatcaaccaaggcgtgatcggccgcacgccttccaagatcttcggcatt
ggaacggactggcagcgcaactggacctggccgcaatgggatatcggatcgctctcgttc
aactccaatacggcgattggcgaagactcctatgtgaaggtgaaggcgttctacaacacg
tttgacaacctcctgtcgtcctacgacgacagcacgttcacgacgcagcaggagaagcgg
gccttcgacagctactacgatgaccatgcctacggcctaagcgtcgaagccgggacggaa
ttcgagagcaacagcctgaaggctgctctccattatcgccgggatagccatacggaatgg
aacgacaatcgaccggatcacccgaccagtcgcctgcttgaaccgaggcagacccaggtt
gaagacggcctggctttcgcgctggagaatacgtaccacatcaccgacacgctcgatctc
gttgctggcgccagctatgagaaaacgacgctgaaacgcgccgaggaatacgacaagaac
accagtgcggtcttctcctatccgcttggcggcagcgattccttaaattggcagacggcc
gccatatggcgcccgaccgccgtgaccgagcttcatgccagcgtttcctcgcgcacgcgc
tttcccaacatgttcgagcggttcagcacgcgcttcgacacggcgctgcccaatcccgat
ctcggccccgagcgtgcggtcaatttcgaagtcggcggcgagaccgagctgacggacacg
tggcgcggctccggcgccctattctacagcgacgtcaaggatgtcatccagtcggtcggc
gtcaatgccaccacggggcagaaccagaatgtcggcgacgggcgatattatggcttcgaa
ctgaccaccgagtgggatgccacggaagagctgacggttggtggtaactacacgtatctc
aagcgagagatcactgatgcgcttctcccgaacctgcgctcgaccggcgtgccggagcat
ctattttttgcccatgctacctggaatccgacggaaaagctgtcggtgaccgggagcctg
gaggcatcgtcctcccgctggtcggacaacccggtgaagaacggtccatatatcgagacc
ggcggtttcgctctcgcgaacctgaatttcgagtacaagttcacggaggcccattccgcc
agcttcggcgtccgcaacctgttcgacaggaactacgagcttgtcaccgggttcccggag
gccggacgcacgttttacctgaatgcacgcgccacgttctga
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