Shinella zoogloeoides: K8M09_10655
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Entry
K8M09_10655 CDS
T07727
Name
(GenBank) L,D-transpeptidase
Organism
szo
Shinella zoogloeoides
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UEX80092
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Position
2134803..2136257
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AA seq
484 aa
AA seq
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MQSGRSTAVNSIFKTSISFLAAASVLGFAALPAKAQQQQLSRNTILVSPEGDILDYVPDD
GSMRWGRDSRGRKVLIDAWGDIVATAVPADRYFGNDGDAAPSRRERYREARGYSETNPDY
FPPAPGAEYDDNLTTSSVPEMREALPDDRDRRTPPDTDFGNTQPMPGLSDDPDEALALPA
EGTDPNTEFVPGPKFAPAAALGKMSSAEVTALQVFLDREGFSPGVIDGKKGSNVTKAIEA
WQNATGETLDPNNADDILERLRLSGGMAFTTYEITAADAAGPYVASIPDDYAHKAALPHL
SFTSTEEMLGEKFHMDVAYLKEINPGVDFTIPGTLVKVVDIGEKKTGKVAKILADKGRKQ
VLAYDANGTLIAAYPASIGSSDTPSPSGTVTVQRIALNPGYTYNPKINFKQGNNDKVLTL
QPGPNGPVGTVWIALSKPTYGIHGTPEPSKIGKTQSHGCIRLTNWDATELAKMTSAGVTV
EFVD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctggcaggtcaacagccgtgaattcgattttcaaaacaagcatttcgtttctt
gcagccgcatccgttctcggattcgcggccctgccggccaaggcccagcagcagcagctc
tcccgcaatacgattctggtttcgcccgaaggcgatatcctcgactatgttcccgacgac
ggcagcatgcgctggggacgcgacagccgcggccgcaaggtgctgatcgacgcctggggc
gatatcgtcgcgaccgccgtgccggccgaccgctatttcggcaatgacggcgatgccgcc
ccctcgcgccgcgagcgttaccgcgaagcccgcggctattcggaaacgaacccggactat
ttccccccggcccccggcgccgaatatgacgacaacctgacgaccagctccgtgccggaa
atgcgcgaggcgctgccggacgacagggatcgccggacgccgccggataccgatttcggc
aatacgcagcccatgcccggcctttccgatgacccggacgaggcgctggcgctgccggcg
gaaggcaccgatccgaacaccgaattcgtgcccggcccgaaattcgcgccggcggccgcg
ctcggcaagatgtcgtccgccgaggtcaccgcccttcaggtgttcctcgaccgcgagggc
ttctccccgggcgtgatcgacggcaagaaggggtccaacgtcaccaaggccatcgaggcc
tggcagaacgccaccggcgagacgctcgatccgaacaatgccgacgatattctggagcgc
ctgcgcctgtccggcggcatggccttcaccacttacgagatcaccgccgccgacgcggcc
ggtccctatgtggcgtcgatcccggacgactatgcccacaaggccgcgctgccgcatctc
tccttcacctcgacggaagagatgctgggcgagaagttccacatggacgtcgcctatctg
aaagagatcaatccgggcgtcgacttcaccattcccggcacgctcgtcaaggtcgtcgat
atcggtgagaagaagacgggcaaggtcgcaaagatcctcgccgacaaggggcgcaagcag
gtgctcgcctatgacgcgaacggcacgctgatcgccgcctatccggcgtccatcggctcg
tcggacacgccctcgccctccggcacggtgacggtccagcgcatcgcgctcaatccgggc
tacacctacaatccgaagatcaacttcaagcagggcaacaacgacaaggtgctgacgctg
caacccggcccgaacggcccggtcggcaccgtctggatcgcgctctccaagccgacctac
ggcatccacggcacgccggaaccgtccaagatcggcaagacccagagccacggctgcatc
cgcctgaccaactgggacgccaccgagcttgccaagatgacgagcgccggcgtgacggtc
gaattcgtcgactga
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