Shinella zoogloeoides: K8M09_11655
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Entry
K8M09_11655 CDS
T07727
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
szo
Shinella zoogloeoides
Pathway
szo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8M09_11655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szo03019
]
K8M09_11655
Enzymes [BR:
szo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K8M09_11655
Messenger RNA biogenesis [BR:
szo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K8M09_11655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
UEX80280
LinkDB
All DBs
Position
complement(2332918..2334177)
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AA seq
419 aa
AA seq
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MTSVSGETWFSDPALMRVLALLNGDGGEARVAGGAVRNSLMGLPVADVDIATTLRPQAVV
ERAKAAGIKAVPTGIEHGTVTLVIDGVPFEVTTLRRDVATDGRHAEVAFGTDWQADAERR
DLTINALYATQDGAVIDLVNGLPDIESRTVRFIGDAATRIAEDHLRILRFFRFFALYGSG
RPDAEGLKACARAKESLARLSAERVWSETKKLLGAPDPGRALLWMRQAGVLTEILPETEK
WGIDAIPGLIEAEKAFGWTPDALLRLAAMVPADRERLKRLAERLRLSKAEAAMLDYWASA
PEIAPKLAETAFDRLLYRNGPQGLVMRLRLALAAARARGPGDPAALVCAGLCQRLLARAG
KWRKPSFPLTGADVLAAGIPAGPKVGAALSAIEDAWVAGNFHESRAKLLARLEVLATEG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgtctccggcgagacatggttttccgatccggcgctgatgcgcgtgctggcg
ctgctcaacggcgacggcggcgaggcgcgcgtggccggcggggccgtgcgcaacagcctg
atgggcctgccggtggccgatgtggatatcgccacaaccctgcggccacaggccgtggtg
gagcgggcgaaggcggcgggcatcaaggcggtgccgacgggcatcgaacacggtacggtg
acgctcgtcatcgacggcgtgcccttcgaggtgaccacgctgcgccgggatgtcgcgacg
gacgggcggcacgcggaagtcgccttcggcaccgactggcaggccgatgccgagcggcgc
gacctcaccatcaatgcgctctacgccacgcaggacggggcggtgatcgacctcgtgaac
ggcctgccggatatcgaaagccgcacggtgcgcttcatcggcgacgccgcgacgcgcatc
gcggaggatcacctgcgcatcctgcgtttcttccgtttcttcgcgctctatggcagcggc
cggccggatgcggaggggctgaaggcctgcgcgcgggcgaaggagagccttgcaaggctg
tcggccgagcgggtctggtccgagacgaagaagctgctcggcgcgcccgatccgggccgc
gcgctgctgtggatgcggcaggcgggcgttctcacggaaatcctgcccgagacggaaaag
tggggcatcgacgccattcccggcctgatcgaggcggaaaaggccttcggctggacgccg
gacgcgctgctgcgccttgccgccatggtgcccgccgaccgggagcggctgaagcggctc
gccgagcgcctgcgtctttccaaagcggaagccgccatgctcgattactgggcatccgcg
ccggagattgcgccgaagcttgccgaaaccgccttcgaccggctgctgtaccgaaacggg
ccgcaagggctggtgatgcgcctcaggctggcgcttgccgccgcgcgggcgcgcgggccg
ggcgatcccgcggcgctggtctgcgccggcctctgccagcggcttctggcgcgcgccggc
aagtggcggaagccgtccttcccgctgacgggcgcggatgtgctggccgccggtattccc
gccggaccgaaggtcggcgcggcgctgtcggccatcgaggacgcgtgggttgccgggaat
ttccatgagagccgggcaaagctgcttgcccggctggaggttcttgcaacggaaggctga
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