Shinella zoogloeoides: K8M09_12100
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Entry
K8M09_12100 CDS
T07727
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
szo
Shinella zoogloeoides
Pathway
szo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K8M09_12100 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
szo02000
]
K8M09_12100 (xylF)
Transporters [BR:
szo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
K8M09_12100 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
DHQS
ABC_sub_bind
PapD_C
SET_assoc
Motif
Other DBs
NCBI-ProteinID:
UEX80362
LinkDB
All DBs
Position
2428270..2429313
Genome browser
AA seq
347 aa
AA seq
DB search
MKSVLKLMAGAAIIVSLHSAAAHAKDLVVGVSWSNFQEERWKTDEAAIKAALEASGDKYI
SADAQSSAAKQLTDIESLIAQGANAIIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIENP
SAFYITFDNKEVGRMQAREVFKVKPEGNYVFIKGNSADPNADFLFAGQQEVLKEAIDAGK
IKNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAALTAQGLAGSVP
VSGQDADHAALNRVALGTQTVSVWKDSRELGKRAAEIAAQLAGGKTMDQIDGVTTFAGGP
KGVEMKSVFLAPLPITKDNLNVVIDAGWISKDAACQGVAAGSVEACK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgttctgaagctgatggcaggggctgccatcattgtttccctgcattccgcc
gccgcgcacgccaaggacctcgtcgtcggcgtttcctggtcgaacttccaggaagagcgc
tggaaaaccgacgaagccgccatcaaggcagcgctcgaggcctccggcgacaagtacatt
tccgctgacgcccagtcctctgccgcaaagcagctcaccgacatcgagtcgttgatcgcc
cagggcgcgaacgccatcatcgtgcttgcgcaggatagcgacgccatcggcccggccatc
gaaaaggccgcagcggaaggcatcccggtcgtcggctacgaccgcctgatcgagaacccg
tccgccttctacatcaccttcgacaacaaggaagtcggccgcatgcaggcccgcgaagtg
ttcaaggtgaagccggaaggcaactatgtcttcatcaagggcaactccgccgacccgaac
gccgacttcctcttcgcaggccagcaggaagtgctgaaggaagccatcgacgccggcaaa
atcaagaatgtcggcgaagcctataccgatggctggaagccggaaaacgcccagaagaac
atggaacagttcctgacggcgaacgacaacaaggtcgacgcggtcgtcgcctcgaacgac
ggcacggccggcggcgcgatcgccgcgctgaccgcgcagggccttgccggctccgtcccg
gtctccggccaggacgccgaccacgccgcgctcaaccgcgtcgcgctcggcacgcagacg
gtctccgtctggaaggactcccgtgaactcggcaagcgcgccgcggaaatcgccgcccag
ctcgccggcggcaagaccatggaccagatcgacggcgtgaccaccttcgccggcggcccg
aagggcgtcgagatgaagtcggtcttcctcgctccgctgccgatcaccaaggacaacctg
aacgtcgtcatcgacgccggctggatctccaaggatgcagcctgccagggcgtcgcggcc
ggctcggtcgaagcctgcaagtaa
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integrated database retrieval system
