Shinella zoogloeoides: K8M09_12735
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Entry
K8M09_12735 CDS
T07727
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
szo03000
]
K8M09_12735 (rutR)
Transcription factors [BR:
szo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
K8M09_12735 (rutR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TPR_4
Motif
Other DBs
NCBI-ProteinID:
UEX80476
LinkDB
All DBs
Position
complement(2542839..2543489)
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AA seq
216 aa
AA seq
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MALPRAAKTQRRTRIQEAKEEQILEAALEVFSLHGFRGATVDQIAEVAGMSKPNLLYYFR
TKEAMHRALITRVLDTWLDPLREFDAAGNPVAEIRSYIRRKLEMARDFPRESRLFANEIL
QGAPNIEDELKGPLKSLVDEKAAVIRAWAKAGKIAKCDPYHLIFSIWSTTQHYADFDVQV
RAVLGQDQSGEGRFEDAARFLEQLFVTGLDISEEQA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccgagggcggcgaagacacagcggcgcacacgcatccaggaagcgaaggag
gagcagatcctcgaagcggcgctggaggtgttttcgctgcacgggtttcgcggcgcgacg
gtggaccagatcgccgaggtggcgggcatgtccaagccgaacctgctctattatttccgc
accaaggaggcgatgcaccgggcgctcatcacccgtgtgctcgatacctggctcgatccg
ctgcgcgagttcgatgcggcgggcaatccggtggcggaaatccgcagctacatccgccgc
aagctggaaatggcgcgggattttccccgggaaagtcggctcttcgccaatgaaatcctg
cagggcgcgccgaatatcgaggacgagttgaaggggccgctgaaatcgctggtcgacgag
aaggctgcggtcatccgggcctgggccaaggcgggcaagatcgccaaatgcgatccctac
cacctgattttctcgatctggtcgaccacgcagcactatgccgacttcgacgtgcaggtg
cgcgcggtgctgggacaggaccagtccggcgaagggcgcttcgaggatgcggcgcgcttc
ctcgaacagcttttcgtgaccggcctcgacatcagcgaggagcaggcctga
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