Shinella zoogloeoides: K8M09_13205
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Entry
K8M09_13205 CDS
T07727
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
szo
Shinella zoogloeoides
Pathway
szo02010
ABC transporters
szo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K8M09_13205
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K8M09_13205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
szo02000
]
K8M09_13205
Transporters [BR:
szo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K8M09_13205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
UEX80563
LinkDB
All DBs
Position
complement(2647862..2648920)
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AA seq
352 aa
AA seq
DB search
MRFATTLALMTGLIAGYALAADGVTTGPNGETPTAAGTVTLTAEEEQKIKDGKFTAALVW
HEMSEYTNAVNAGAQDEFKRLGIEVVAQTDAGFDAARQKADVETVLAKKPSIIVSLPVDP
ASAAPVYDPARAAGVKLAFVDNSPAGYAHGKDYVTIVSDDLFQMGSKAAVAMADALGKKG
KVGYIFHDADFYVTNQRDQAFKKTIEQDYPDMKIVAEQGMADPARSEEIAQAMVTQHPDL
DGIYVTWAEPALSVLAALRSAGNTHTKIVTLDLNEPAALDMVKGGSVAALVADEAYDIGV
TAARSAAGAMLGKEAAPFLVVDSLAVTKDTVKEGWKTSLNKDVPQSITDALK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgcaacgacactcgccctgatgaccggcctcatcgccggctacgcccttgcc
gccgacggtgtgacgaccggcccgaacggcgagaccccgacggccgcaggcaccgtcacg
cttaccgccgaggaagagcagaagatcaaggacggcaaattcacagccgccctcgtctgg
cacgagatgagcgaatataccaatgcggtgaatgccggcgcgcaggacgaattcaagcgc
ctcggcatcgaggtggtcgcgcagaccgatgcgggcttcgacgccgcgcgccaaaaggcc
gatgtcgagactgtgctggcgaagaaaccgtcgatcatcgtttccctgccggtcgacccg
gcaagcgccgcgccggtctacgatccggcccgcgcggcgggcgtcaagcttgccttcgtc
gacaattcgccggctggctacgcgcatggcaaggattatgtgaccatcgtttccgacgat
ctcttccagatgggcagcaaggccgccgtcgccatggccgatgccttgggcaagaagggc
aaggtcggctacatcttccacgatgccgatttctacgtgaccaaccagcgcgaccaggcc
ttcaagaagaccatcgagcaggactatcccgacatgaagatcgtcgccgagcagggcatg
gccgatcccgcccgcagcgaggagattgcgcaggcgatggtcacgcagcatcccgatctc
gacggcatctatgtcacctgggcggaaccggcgctgagcgtgctcgccgccctgcgctcg
gccggcaacacgcatacgaagatcgtcacgctcgaccttaacgagccggcggcgctcgac
atggtcaagggcggcagcgtcgcggcgctggtggcggacgaggcctatgacattggcgtc
acggcggcccgttcggcggcaggcgcgatgctcggcaaggaggctgcgcccttcctcgtc
gtggattccctcgccgtcacgaaggatacggtgaaggaaggctggaagacgtcgctcaac
aaggacgtcccgcagtcgatcaccgatgcattgaagtaa
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