KEGG   Shinella zoogloeoides: K8M09_13375
Entry
K8M09_13375       CDS       T07727                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
szo  Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:szo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:szo03021]
    K8M09_13375 (rpoH)
Transcription machinery [BR:szo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     K8M09_13375 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 Sigma70_r4_2 Sigma70_r3
Other DBs
NCBI-ProteinID: UEX80591
LinkDB
Position
2686331..2687236
AA seq 301 aa
MARNTLPSITAGEGGLNRYLDEIRKFPMLEPQQEYMLAKRYQEHGDRNAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRMKGKIQAIEDGDLRPDQVKEIATKLKVSEDEVVSMNRRL
SGDASLNAPIKAGEGESGQWQDWLVDDHDSQEATLIEQDELDTRRAMLARAMGVLNERER
RIFEARRLAEDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKYAAEQARAVRVIED
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcccgcaatacgctgccgtctatcacggctggagaaggtggtctcaaccgctatctc
gacgaaatccgcaaatttccgatgcttgagccgcagcaggaatacatgctcgccaagcgt
taccaggagcacggcgaccgcaacgccgcccataagctcgtcacgagccatctgcgcctc
gtggcgaagatcgccatgggctatcgcggctacggcctgccgatcggcgaagtcgtctcc
gagggcaatgtcggcctgatgcaggccgtcaagaaattcgacccggagcgcggcttccgc
cttgcgacctacgccatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtcgctggtgaagatgggcacgaccgccaaccagaagcgcctattcttcaacctgcgc
cgcatgaagggcaagatccaggccatcgaggacggcgacctgcgtcccgatcaggtcaag
gagatcgccaccaagctgaaggtctcggaggacgaggtcgtctcgatgaaccgccgcctc
tccggcgacgcctcgctgaacgcgcccatcaaggccggcgaaggcgaatccggccagtgg
caggattggctcgtggacgaccacgacagccaggaagcaacgctgatcgagcaggacgag
ctcgatacgcgccgcgccatgctggcccgcgccatgggcgtgctgaacgaacgcgaacgc
cgcatcttcgaggctcgccgcctcgccgaggacccggtgacgctggaagagctgtccagc
gagttcgacatcagccgcgagcgcgtccgccagatcgaggtccgcgccttcgagaaggtg
caggaagcggtgcagaaatatgccgccgaacaggcccgcgccgtccgcgtcatcgaggac
gcataa

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