Shinella zoogloeoides: K8M09_14040
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Entry
K8M09_14040 CDS
T07727
Symbol
odc2
Name
(GenBank) ornithine/lysine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00330
Arginine and proline metabolism
szo00480
Glutathione metabolism
szo01100
Metabolic pathways
szo01110
Biosynthesis of secondary metabolites
szo04148
Efferocytosis
Module
szo_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
K8M09_14040 (odc2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
K8M09_14040 (odc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
K8M09_14040 (odc2)
Enzymes [BR:
szo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
K8M09_14040 (odc2)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UEX80714
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Position
complement(2831853..2832986)
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AA seq
377 aa
AA seq
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MASARIIDFLNTRRPDGPCLVVDLDVVRDNFKAFRHALPDSAIYYAVKANPAPEILRLLA
SMGSNFDCASVAEIEMALDAGATASRVSFGNTIKKERDVAKAHALGVSLFAVDSHEEVEK
IARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLTSYGVSFHVGSQ
MTKLDAWDSALADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGKAIFGALK
KHFGNQIPETIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTVRDADAMEPCVLAGPTCDSADVMYEKNMYPLPVTLSIGDEVLIEGTGAYTTT
YSAVAFNGFEPLRAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacgtattatcgactttctgaacacccgacgtcccgacggcccgtgcctc
gtggtcgatctcgatgtcgtgcgcgacaacttcaaggccttccgccacgcgctgcccgac
agcgcgatctactatgccgtgaaggccaatccggcgccggaaatcctgcgcctgctcgcc
agcatgggctccaacttcgattgcgcgtccgtcgccgaaatcgaaatggcgctcgacgcc
ggcgcgaccgcttcgcgcgtctctttcggtaacacgatcaagaaggaacgcgacgtcgcc
aaggcgcacgcgctcggcgtctcgctcttcgccgtcgacagccatgaggaagtcgagaag
atcgcgcgcgccgctcccggcgcccgcgtgttctgccgcgtcctgacggatggcgaaggc
gccgaatggccgctgtcgcgcaagttcgggtgcgtaccgcagatggccgtcgacgtgctc
gtctatgcgcaccagctcggccttacctcctacggcgtctcgttccatgtcggctcgcag
atgacgaagctcgacgcctgggattcggcccttgccgatgccaagcgcgtcttcgtgcag
cttgccaagcagggcatcgagctgaagatggtcaatatgggcggcggcttcccgacgaag
tacctgcgcgacgtgccctcggccgaagcctatggcaaggcgatcttcggtgcgctgaag
aagcatttcggcaaccagatcccggaaaccatcatcgagccgggccgcggcatggtcggc
aatgcgggcgtgatcaaggcggaagtcgtcctcgtctcgaagaagtcggacaacgacaac
caccgctgggtcttcctcgacatcggcaagttcggcggccttgccgaaaccatggacgag
gcgatccgctacccgatccgcaccgtgcgcgatgcggacgcgatggagccctgcgtgctt
gccggcccgacctgcgattcggccgacgtgatgtacgagaagaacatgtacccgctgccg
gtcaccctttcgatcggcgacgaggttctgatcgaaggcaccggtgcctatacgacgacc
tactcggccgtcgccttcaacggcttcgagccgctcagggcctacgtcatctga
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