Shinella zoogloeoides: K8M09_14300
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Entry
K8M09_14300 CDS
T07727
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
szo
Shinella zoogloeoides
Pathway
szo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8M09_14300 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szo03400
]
K8M09_14300 (ung)
Enzymes [BR:
szo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K8M09_14300 (ung)
DNA repair and recombination proteins [BR:
szo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K8M09_14300 (ung)
Prokaryotic type
K8M09_14300 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UEX80759
LinkDB
All DBs
Position
complement(2891490..2892185)
Genome browser
AA seq
231 aa
AA seq
DB search
MAATDIKIGESWKAPLAAEFTSPYMAELKSFLLEQKQEGRRIFPKGAEYFRALDLTPLDE
VRVVILGQDPYHGEGQAHGLCFSVQPGVRTPPSLVNIYKEMQSDLGIAPARHGFLEHWAR
QGVLLLNSVLTVEMGRAASHQGRGWERFTDAVIRAVNEQEKPVVFILWGSYAQKKAAFVD
KSRHLVLRSPHPSPLSAHNGFFGTRPFSKANEFLEKHGRTPIDWQLPATVE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgacggatatcaagatcggcgagagctggaaggccccgctcgcggcggaattc
accagcccctacatggccgagctgaagagcttccttctggagcagaagcaggaggggcgg
cgcattttcccgaagggggcggaatattttcgcgcgctggacctgacgccgctcgacgag
gtgcgcgtcgtcattctcgggcaggatccctatcacggcgaggggcaggcgcatggcctg
tgcttttccgtgcagccgggtgtgcgcacgccgccctcgctcgtcaatatctacaaggaa
atgcagtctgaccttggcattgcgccggcccgccacggctttctcgaacattgggcgcgg
cagggcgtgctgctgctcaacagcgtgctgacggtggagatgggccgtgcggcctcccat
cagggccggggctgggagcggttcacggatgcggtcatccgcgccgtcaacgagcaggaa
aagcccgtcgtcttcatcctctggggttcctatgcgcagaagaaggcggccttcgtcgac
aagagccgccatctcgtgctgcgttcgccgcatccctcgccgctttcggcgcataacggc
ttcttcggcacgcggccgttctccaaggcgaacgaattccttgaaaagcacggccgcacg
ccgatcgactggcaactgccggcaacggtggagtaa
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