Shinella zoogloeoides: K8M09_14850
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Entry
K8M09_14850 CDS
T07727
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
szo
Shinella zoogloeoides
Pathway
szo02010
ABC transporters
szo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K8M09_14850 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8M09_14850 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
szo02000
]
K8M09_14850 (lsrA)
Transporters [BR:
szo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
K8M09_14850 (lsrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_29
AAA_30
nSTAND1
RMMBL
Motif
Other DBs
NCBI-ProteinID:
UEX80865
LinkDB
All DBs
Position
3009971..3011473
Genome browser
AA seq
500 aa
AA seq
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MTDSPAAGRVAKLTDIWKSYGAVPVLKGVSLALQAGEVHALLGGNGAGKSSLMKIMSGVI
PANSGEIEINGRALAHASPAHAQELGLYLVPQEAHILPNQSVLENICLGLAASPKALRPR
VEQLVAELSVSLDLDAQAAALEIAERQIVEILRGLVRDARVLILDEPTSALTPFETSALF
QRVRKLQAQGVGIFFISHKLREIREICGTISVLRDGVIVLSGPLDSYSDAEIIDAMSRVQ
ITEASSKDRTGRKVSQIGQPRLSVRGLSGEGFRNISLDVRAGEILGLAGVVGAGRTEFAE
TLFGLRPQTAGSVVFDGAELKKRSPRLCIDRGLVYLPEDRQQHGLFLEAPLFWNVSSYLV
HRLPFFLRPGAERKAFDEFRSSMGIKCTGPGQEARGLSGGNQQKVLLAKCLSARPKVLIL
DEPTRGVDVAARNDIYDLIRKLAAEGVAIVLISSDFDEIEQLADRVEVMAFGQSGGELTD
DISVDAIARLAFGASEARHA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacggatagcccggcggccgggagggtcgcgaagctgacggacatctggaagtcctac
ggtgccgttccggtgctgaagggcgtttcgctcgccttgcaggccggggaagtgcatgcg
cttctcggcggcaacggcgccggcaagtcgagcctcatgaagatcatgtcgggcgtcatc
ccggccaattccggcgaaatcgagatcaacggccgggcgctcgcccatgcctcccccgcc
catgcgcaggagctcggcctctatctggtgccgcaggaagcccatatcctgccgaaccag
agcgtgctggaaaacatctgcctcggccttgccgcctcgccgaaagcgctgcgcccgcgc
gtcgaacaactcgtcgcggaactctccgtctccctcgacctcgacgcccaggccgccgcc
ctcgaaatcgccgagcggcagatcgtcgaaatcctgcgcggcctcgtgcgcgatgcacgc
gtgctgatcctcgacgaaccgacctcggcgctgacccccttcgagacgagcgcgctcttc
cagcgcgtgcgcaaattgcaggcgcagggcgtcggcatcttcttcatctcgcacaagctg
cgcgagatccgcgagatctgcggcacgatcagcgtcttgcgcgacggcgtgatcgtgctg
tccggcccgctcgacagctacagcgacgccgagatcatcgacgcgatgagccgcgtgcag
atcaccgaagcctccagcaaggaccgcaccggccgcaaggtctcgcagatcggccagccg
cgcctcagcgtgcgcggcctgagcggcgagggtttccgcaatatcagcctcgacgtcagg
gccggcgaaatcctcggccttgccggcgtcgtcggcgcggggcgcacggaattcgccgaa
acgctcttcggcctgcgcccccagacggcgggcagcgtggtcttcgacggcgcggaactg
aagaagcgctcgccgcgcctctgcatcgaccgcggcctcgtctacctgccggaagaccgc
cagcagcatggcctcttcctcgaagcgccgctcttctggaacgtctcgtcctatctcgtg
catcgcctgcccttcttcctgcgccccggcgcggaacggaaggccttcgacgaattccgc
tccagcatgggcatcaaatgcaccggccccggccaggaggcgcgcggcctttcgggtggc
aaccagcagaaggtgctgctggcgaaatgcctgtcggcccggccgaaggtgctgatcctc
gacgagccgacgcgcggcgtcgacgtcgcggcccgcaacgatatctacgacctcatccgc
aagctcgccgcagaaggcgtcgccatcgttctcatctcttcggatttcgacgagatcgaa
cagctcgccgaccgcgtcgaggtcatggccttcggccagtccggcggggagctgacggac
gacatctcggtggacgccatcgcccgccttgccttcggcgcctcggaggcccgtcatgct
tga
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