Shinella zoogloeoides: K8M09_15165
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Entry
K8M09_15165 CDS
T07727
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00630
Glyoxylate and dicarboxylate metabolism
szo00680
Methane metabolism
szo01100
Metabolic pathways
szo01120
Microbial metabolism in diverse environments
szo01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K8M09_15165 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K8M09_15165 (fdhF)
Enzymes [BR:
szo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K8M09_15165 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_6
Fer4_9
Fer4_15
Fer4_2
Fer4_16
Fer4_8
Fer4_4
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
UEX80919
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All DBs
Position
3080776..3083655
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AA seq
959 aa
AA seq
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MPLVPEIDFGTPASRSQKMVTLTIDGNEISVPEGTSIMRASMEAGIQVPKLCATDMVDAF
GSCRLCLVEIEGRGGTPASCTTPVAPGLVVHTQTSRLKQIRKGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARSNGEANARWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFDSRVSPGMHENFLSSECVSCGACVQACPTATLTEKS
VIEIGQPEHSVVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THRERILNPMIREKISYPWREVTWEEAYAHVASEFRRIQYQYGRDSVGGITSSRCTNEET
YLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQAFGTSAGTQNFDSVEFTDVVIIIGANP
TDAHPVFGSRLKKRLRQGAKLIVIDPRRIDLVSSPHIKASYHLPLRPGTNVAVVTALAHV
IVTEGLYDEAFIRERCDWSEFEDWAAFVAEPRHSPEETEALTGVPAEALRGAARLFATGG
NGSIYYGLGVTEHSQGSTTVMAIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDVFEKMWGVKLNNEPGLRINNMLDAAVEGTFMGLYIQGEDILQSDP
DTRHVSAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRRVMT
PKNGYADWEVTQNLAKTMGLDWNYAHPSEIMDEIAATTPSFALVSYDYLDKIGSVQWPCD
EKHPLGSPIMHTDGFVRGKGKFIRTEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRT
DNVVWHEEDRLEIHPHDADNRGIRDGDWVRLASRAGETTLRALVTDRVAPGVVYTTFHHP
MTQANVITTDFSDWATNCPEYKVTAVQISPSNGPSDWQVEYDELSKRSRRIAGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgttcctgaaatcgacttcggtacccccgcctcccgctcgcagaagatggtg
acactcaccatcgacggcaacgagatttccgttcccgagggcacctccatcatgcgcgcc
tccatggaggccggcattcaggtgccaaaactctgcgccaccgacatggtcgacgccttc
ggctcctgccgcctctgtctcgtggagatcgagggccggggcggcacgcccgcctcctgc
accacgcccgtcgcgccgggcctcgtcgtccatacccagacgagccgcctcaagcagatc
cgcaagggcgtgatggagctttacatctccgaccacccgctcgactgcctgacctgcgcg
gcgaacggcgactgcgaattgcaggacatggcgggggccgtcggcctgcgcgacgtgcgc
tacggctacgagggcgacaaccacgtcaaggcccggagcaacggcgaggcgaacgcccgc
tggatgccgaaggacgaatcgaacccctatttcacctacgacccctccaagtgcatcgtc
tgctcgcgctgcgtgcgcgcctgcgaggaagtgcagggcaccttcgcgctgaccatcgag
ggccgcggcttcgacagccgcgtctcgcccggcatgcacgagaatttcctctcctccgaa
tgcgtctcctgcggcgcctgcgtgcaggcctgcccgaccgcgacgctcacggaaaagtcg
gtcatcgagatcggccagccggaacattccgtcgtcaccacctgcgcctattgcggcgtc
ggctgctccttcaaggcggagatgcgcggcgaggaactggtgcgcatggtgccgtggaag
gacgggcaggccaaccgcggccattcctgcgtcaagggccgcttcgcctatggctattcg
acccatcgtgaacgcatcctcaaccccatgatccgcgagaaaatctcctatccctggcgg
gaagtgacctgggaagaggcctatgcccatgtcgcgtcggaattccgccgcatccagtac
caatatggccgcgattccgtcggcggcatcacctcctcgcgctgcaccaacgaggagacc
tatctcgtccagaagctgatccgcgccggcttcggcaacaacaatgtcgacacctgcgcc
cgcgtctgccattcgccgaccggctacggcctcggccaggccttcggcacctccgccggc
acgcagaacttcgacagcgtcgagttcaccgatgtcgtgatcatcatcggcgccaacccc
accgacgcccacccggtcttcggctcgcgcctcaagaagcgcctgcgccagggtgcaaag
ctcatcgtcatcgatccgcgccgcatcgacctcgtctcctcgccgcacatcaaggcgtcc
tatcacctgccattgcgccccggcaccaacgtcgccgtcgtcacggcgcttgcccatgtc
atcgtgacggaaggtctttacgacgaggcattcatccgcgagcgctgcgactggtcggaa
ttcgaggactgggccgccttcgtcgccgaaccgcgccacagcccggaggaaaccgaggcg
ctgaccggcgttccggccgaggcgctgcgcggcgcggcccgcctcttcgccaccggcggc
aacggctcgatctattacggcctcggcgtcaccgagcacagccagggctcgaccaccgtc
atggccatcgccaacctcgccatggcgaccggcaatatcggccgcgagggcgtcggcgtg
aacccgctgcgcggccagaacaacgtgcagggctcgtgcgacatgggctccttcccgcat
gagctgccgggctaccgccacatctccgacgatgccacccgcgacgtattcgagaagatg
tggggcgtgaagctcaacaacgagccgggccttcgcatcaacaacatgctggacgccgcc
gtggaaggcacgttcatgggcctctacatccagggcgaggacatcctccagtccgacccg
gacacgcggcacgtctccgccggcctcgccgccatggaatgcgtcgtcgttcaggacctc
ttcctcaacgagacggcgaactacgcccatgtcttcctgcccggctcgaccttcctcgag
aaggacggcaccttcaccaatgccgagcgccgcatcaaccgcgtgcgccgcgtcatgacg
ccgaagaacggctatgccgactgggaggtgacgcagaacctcgccaaaacgatgggtctc
gactggaactacgcccacccgtccgagatcatggacgagatcgccgcgacgacgccgagc
ttcgccctcgtctcctacgactacctcgacaagatcggctcggttcagtggccctgcgac
gagaagcatccgctcggctcgccgatcatgcacacggacggcttcgtacgcggcaagggc
aagttcatccgcacggaatatgtcgcgaccgacgagaagaccggcccgcgcttcccgctg
ctgctcaccaccggccgcatcctcagccagtacaatgtcggcgcgcagacccgacgcacc
gataacgtggtctggcacgaggaggaccggctggaaatccatccgcacgacgccgacaat
cgcggtatccgcgacggcgactgggtgcggctggcaagccgggccggcgagacgacgctg
cgcgccctcgtcaccgatcgcgttgcgccgggcgtcgtgtacacgaccttccaccatccg
atgacgcaggcaaacgtcatcaccaccgacttctccgactgggcgacgaactgcccggaa
tacaaggtgaccgccgtgcagatttccccctccaacggcccgtccgactggcaggtggaa
tatgacgagctgtcgaagcggtcgcgccgcatcgccggcaagctggaggcggcggagtag
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