KEGG   Shinella zoogloeoides: K8M09_16775
Entry
K8M09_16775       CDS       T07727                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
szo  Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:szo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:szo02048]
    K8M09_16775
Enzymes [BR:szo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     K8M09_16775
Prokaryotic defense system [BR:szo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   K8M09_16775
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD HNH HNH_2 HNH_4 HNH_5
Other DBs
NCBI-ProteinID: UEX81211
LinkDB
Position
3416518..3420072
AA seq 1184 aa
MPTSRPAIPIEIKRDVLFEARHHCAVCCTSLPLEYAHLIPWSKSQDHSLENLIALCANCH
ERADNEKWGVSYLQRYKKSPCIIARGDPPPMTAEQKMLVDLIVARDPDEMNQKERQRLVS
MVAAYVGVPFGQIGISSVTQANSSRVRLEMPSDAARRLVAGFEAKDPMLEAFLSEAGLIR
VDAGPSVQGGREMRQHTDTSEKGLETLIVRSLIDEAGYVAGASKDFDRDHAIDLAKLFDF
LNATQPEAVEALGIGEDGPKRLQFLHRVQGEIAKRGVIDVLRNGVKHGPGSVELFFGTPT
PGNTKAEELFAANVFSVTRQLHYSKDATKLSLDAALFINGLPVATFELKNSLTKQTVEDA
IEQYKRDRDPKELLFQFGRCVVHFAVDDHEVRMCSHLKGKASWFLPFNKGWNDGAGNPPN
PHGLKTDYLWKQVLTKRNLTDILENYAQVVEETDERGKKKPPKQIFPRFHQLDVVRKLLA
DAEGSGAGRRYLIQHSAGSGKSNSIAWLGHQLIGLETGGKPTFDTVIVVTDRRNLDKQIR
DTIKQFAQVSSIVGAVTEGSQQLRTFLQQGKKIIITTVQKFPFILDEIGDGHRGRTFAII
IDEAHSSQGGRTSAKMNIALAANGAEEEDETVEDTINRLMEARKVLPNASYFAFTATPKN
KTLEIFGTAVPEGGKVRHVPFHNYSMKQAIEEGFILDVLKHYTPVESYYRLMKTVEDDPQ
FDAKRAQKKLRRYVESHDHAIRKKAEIMVDHFHDQVMAHRKIGGAARAMVVTSGIHRAIQ
YFHAFGEYLKERKSPYQAIVAFSGEHEYGGQKVTEASLNGFPSNKIEELIQKDPYRFLIV
ADKFQTGYDEPLLHTMYVDKTLSGIKAVQTLSRLNRAHPQKHDTFVLDFMNDVDGIKASF
EDYYRTTILSEETDPNKLHDLKARLDGYQVYSWERVEDLVALYLGGADRDKLDPILDACV
AVYKADLDEDGQVDFKGKAKAFTRTYGFLAAILPYTNAEWEKLSIFLNFLTPKLPAPEEQ
DLSKGILEAIDMDSYRVEAQATMAIALPDADAEIGPVPLGGGGRKPEPELDLLSNILKTF
NEMFGNIDWKDADKIGKVIAEELPTKVAADKAYQNAMQNSDKQNARIEHDKALERAVIEL
LSDHTELFKQFSDNPSFKKWLSETIFAATYADKAAQAGSAATRS
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgccgacgagtaggcccgcaatcccaatcgaaataaagcgcgatgtgctcttcgaggct
cgtcatcattgcgctgtctgctgcacgtcgctgccgctcgagtacgcgcacctgattcca
tggagcaagtcgcaagaccattcgctcgaaaacctcattgccctgtgcgcaaactgtcac
gagcgggcggacaacgaaaaatggggcgtgagctacctccaacgatacaaaaagtcaccg
tgcatcattgcacgcggtgatccgccgccgatgacggcagagcagaaaatgctggtcgat
ctgatcgtggcgcgcgatccggatgagatgaatcagaaagagcggcagcgcctggtatca
atggtagctgcttatgtaggtgttccattcggccaaatagggatttcatccgtaacccaa
gccaacagctctcgagttcgtttggaaatgccgtctgacgcggcgcgacgcttggttgct
ggtttcgaggccaaagacccaatgctcgaggcgttcctgagcgaagcgggcctaattcgg
gtcgatgccggcccctcggttcaaggaggccgcgaaatgcgccagcacaccgacacaagc
gaaaagggcctcgaaaccctcatcgtccgctcgctgatcgacgaggcgggttacgtcgct
ggcgcctcgaaggatttcgaccgggaccacgccatcgacctggccaagctgttcgatttc
ctgaacgccacacagccagaggccgtcgaagccctcggcatcggagaagacggtccgaag
cggctgcaattccttcaccgggtgcaaggcgagatcgccaagcgcggtgtcatcgacgtg
ctgcgcaacggcgtgaagcacggccctggatcggtcgagctgttcttcgggacgccgacc
cccggcaacacgaaggccgaggagctgttcgccgccaacgtgttcagcgtcacccggcag
ctgcactattccaaggatgcgaccaagctgtcgctcgacgctgcgctgttcatcaacggc
ctgcccgtcgccacctttgagttgaagaacagcctgaccaagcagacggtcgaggacgcg
atcgagcagtacaagcgcgaccgcgatcccaaggagctgctgttccagttcggccgctgc
gtcgtccacttcgccgtggacgaccacgaggtgcggatgtgcagccacctgaagggcaag
gcgtcctggttcctgcctttcaacaagggctggaatgacggcgcgggcaacccgccgaat
ccgcatggtctgaagaccgattacctttggaagcaagtccttacgaagcgcaacctcacc
gacatcctggagaactatgcgcaggtggtcgaggaaacggacgagcgaggaaagaagaag
ccgccgaagcagattttccctcgctttcaccagctcgacgtggtgcgcaagctgctggct
gacgccgagggctccggcgccgggcggcggtacctaatccagcactcggcaggttcgggc
aagagcaactcgattgcttggctcggccaccagctgatcgggctggagaccggcggcaag
ccgaccttcgacaccgtcatcgttgtcaccgacaggcgcaatctcgacaaacagatccgc
gacaccatcaagcagttcgcgcaggtatcttccatcgtcggcgcggtcaccgaaggctcg
cagcagctgcggacgttcctgcagcagggcaagaagatcatcatcaccacggtgcagaag
ttcccgttcatcctagacgaaattggggacggccatcgcgggcgaaccttcgccatcatc
atcgacgaggcgcattccagccagggcggccggacgtcagccaagatgaacatcgcgctt
gccgcgaatggtgccgaggaggaagacgaaaccgtcgaggataccatcaaccggctgatg
gaagcgcggaaggttctgccgaacgcgagctatttcgccttcaccgcgacacccaagaac
aagacgctggagattttcggcacggcggtccccgagggtgggaaagtcaggcacgtccct
ttccacaattattcgatgaagcaggccatcgaagagggattcatcctcgacgttctcaag
cactacacgccggtcgagagctactaccggctcatgaagacggtggaggacgatccgcag
ttcgacgccaagcgggcgcaaaagaagctccgccgatatgtcgaatcccatgaccatgcc
atccgcaagaaggcagagatcatggtcgaccatttccacgaccaggtgatggcccatcgc
aaaatcggcggagcagcgcgcgccatggtggtgaccagcgggattcaccgggccatccag
tactttcacgccttcggggagtatctgaaggagcgcaagagcccataccaagccatcgtc
gccttctcgggcgagcatgaatatggcggccagaaggtcaccgaggcgtcgctcaacggc
tttcccagcaacaagatcgaggagttgatacagaaggatccgtaccggttcctcatcgtc
gccgacaagttccagaccggctatgacgagccgctgctgcacacgatgtacgtggacaag
acgctgtccggcatcaaggccgtgcagacgctgtcgcgcctgaaccgggcgcatccgcag
aagcacgacaccttcgtgctggatttcatgaacgacgtggatggcatcaaggcgtcgttc
gaggactattaccgcacgacgatcctgagcgaagagaccgatccgaacaagctgcacgac
ctgaaagcgcggctcgatggctatcaggtctattcctgggagcgggtggaggacctcgtg
gcgctgtacctcggtggcgccgaccgcgacaagctcgacccgatcctcgatgcgtgcgtc
gcggtctacaaagccgatctcgatgaggatggacaggtcgacttcaagggcaaggcgaag
gcattcacgcgcacctacggatttctcgcggccatcctgccctatacgaacgcggaatgg
gagaagctctcgattttcctgaacttcctgacgccgaaactgcctgctccggaggagcag
gatctgtcgaagggcattctggaggccatcgacatggacagctacagggtcgaggcgcag
gcgacgatggcgattgcgcttcccgatgccgacgcggaaatcggccctgtgccgttgggc
ggaggcggtcgcaagcctgagccggaattggacctgctcagcaacatcctcaagacgttc
aacgagatgttcggcaacatcgactggaaggacgccgacaagatcgggaaggtgatagct
gaggagttgcccacgaaggtcgcggccgacaaggcctatcaaaacgcgatgcagaattcg
gacaagcagaacgcccgcatcgagcacgacaaggcactggagcgcgcggtcatcgaactg
ctatctgaccataccgagctgttcaaacagttcagcgacaatccatctttcaagaaatgg
ctttcggagacgattttcgcggcgacctatgccgacaaggcggcgcaggccggttcggct
gctactcgcagctga

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