Shinella zoogloeoides: K8M09_17320
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Entry
K8M09_17320 CDS
T07727
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
szo
Shinella zoogloeoides
Pathway
szo03030
DNA replication
szo03430
Mismatch repair
szo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8M09_17320 (dnaQ)
03430 Mismatch repair
K8M09_17320 (dnaQ)
03440 Homologous recombination
K8M09_17320 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
szo03032
]
K8M09_17320 (dnaQ)
03400 DNA repair and recombination proteins [BR:
szo03400
]
K8M09_17320 (dnaQ)
Enzymes [BR:
szo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8M09_17320 (dnaQ)
DNA replication proteins [BR:
szo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8M09_17320 (dnaQ)
DNA repair and recombination proteins [BR:
szo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8M09_17320 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UEX81313
LinkDB
All DBs
Position
3523884..3524588
Genome browser
AA seq
234 aa
AA seq
DB search
MREIIFDTETTGLDNKLDRVIEIGGVELENHFPTGRTLHIFINPGDRKVHPDALAVHGIT
DEFLQDKKPFADVAQDIIDFFDGARWVAHNANFDMGFINAEFGRLGLPPVAPEKVTDTLA
LARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQAALGLGTAE
SGRKTLVEVEDEVIEPLGARPSPLASRLSEADRAAHAAMVEKMGAKAIWAKYSG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcatcttcgatacggaaacgaccggcctcgacaacaagctcgaccgcgtc
atcgaaatcggcggcgtggaactggagaaccatttcccgaccggccgcacgctccatatc
ttcatcaatcccggcgaccggaaggtccatccggacgcgcttgccgtccacggcatcacg
gacgaattcctgcaggacaagaagccatttgccgacgtcgcgcaggacatcatcgatttc
ttcgatggcgcccgctgggtggcgcataacgccaacttcgacatgggcttcatcaatgcc
gaattcggccggctcggcctgccgccggtcgcgccggaaaaggtgacggatacgctggcg
ctcgcccgtcgcaagcatccgatgggaccgaactcgctcgatgcgctctgccgtcgctac
ggcatcgacaattcgcatcgcaccaagcacggcgcgcttctcgactccgaactgctggcc
gaggtctatatcgaaatgatcggcggccggcaggccgctttgggcctgggcaccgccgaa
agcggccgcaagacgctggtcgaggtggaggacgaggtgatcgagccgctcggcgcacgg
ccgtcgccgcttgcctcccgcctttccgaagcggaccgcgcggcccatgccgccatggtg
gagaagatgggcgccaaggcgatctgggcgaaatatagcggctga
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