Shinella zoogloeoides: K8M09_19305
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Entry
K8M09_19305 CDS
T07727
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
szo
Shinella zoogloeoides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Histone_H2A_C
EVI2A
Motif
Other DBs
NCBI-ProteinID:
UEX81676
LinkDB
All DBs
Position
3924366..3931877
Genome browser
AA seq
2503 aa
AA seq
DB search
MRIGKSRGPVKAQIIGSRSSRGWQVSTSVLALALAGGLAMPMPAHADDWIGTISNDWYNA
GNWSAGVPTGAGTTVNINTITPNPTVLNGGTASVGNINIGISGAGSLVVSGGGKLNGAIG
RVGDVTTGTMTVTGPGSEWNSSGFLGVGMSGTGVLNISLRGSVSAASVFLGNSAGSSGTA
TVDGATLTSAGDLYVGYGGTGTLNIVNGGEVSNVHGTIGVDAGSTGTVTVDGAGSIWTNS
GDLTVGDSGTGTLNILNGGAVNSNFGYIGRTAGATGTVTVQGAGSSWTNANSLVVGMLGS
GTLNILNGASVSNSHSSVGLSGGGTGTALVDGTGSTWTNTGLLNVGSNGTGLLTISNGGH
VTSAEGNVGLFGQGTATVSGPGSDWSNSGDLTVSYFAGTGTLTVSNGGTVSSNFGYIGRN
AGSTGTVTVEGAGSSWANTNSLVVGMLGNGTLNILNGASVSNSHSSVGLSGGGTGTALVD
GTGSTWTNTGLLNVGSNGTGLLTISNGGHVTSAEGNVGLFGQGTATVSGPGSDWSNSGDL
TVSHFAGTGTLSVSNGGTVSNYNGYIGRELGGTGLVTVNGAGSTWANANNLRVGDNGSGT
LTISNGGTVSNINAMLAAQDDSSGAVSVDGIGSAWTNSGYLSIGNRGNATLAISSGGAVS
SNGGEIASGALSTSTVTVSGSGSTWTNSDNLIVGNSGVGTLSITGGGKVSNYNAVLGAVA
YTSSGTVNVNGAGSTWTNANNLRVGDNGSGTLTISNGGTVSNINAMLAAQDDSSGAVSVD
GIGSAWTNSGYLSIGNRGNATLAISSGGAVSSNGGEIASGALSTSTVTVSGSGSTWTNNG
DLIVGDSGVGTLSITGGGKVSNYSAVLGAIAYTSSGTVNVDGAGSTWTNSADLIVGKSGT
GTLNITGGGKVSGDSGYLGKDATGAGTAMVQGAGSAWTSTGVLMVGDYGSGGLTILNGGA
VSNTLGVIGNQTGSNGTVLVDGAGSTWTNSASLFVGATGTGSLTVSNGADVTNTVGYIGG
GAAASGTVTVTGAGSTWTNSGNLLVGSFGGGTLTISNGGTVSSQVASIGSSAGSVGAATV
TGAGSTLNTSSSLYVGADGDGTLTIANGGTVNALGGVGITGDAASKGTLNIGGAEGAAAA
AAGILNTTGVQFGAGTGKLNFNHTNANYLFSADIMGAGAINQVAGTTVLTGNSSTFTGTT
GVSGGRLMVNGMLGGTTSVTSGGALGGSGTLTGPVSVASGGALLGVQGQTLGLGSLALSS
GSNVNVALGAPGGAGLFNVAGNLTLDGTLNVSNAGGFGAGVYRIFDYGGALTDNGMAVGS
VPLGTAGTLQTAVANQVNLLVSGTTLDTQFWNGTTTTADGTIHGGSGVWSAGPATNWTDV
NGSTASAWTGNFAVFQNNPGVVTVDTSAGAVSTTGMQFMGQNWSVAGGPVTLNGAGGATT
IRVGDGTAAGSSDYAVISSELTGASRLVKDDLGLLVLTGANTYTGGTTVNAGTLQIGANG
TSGSIQGDIINNSRLFFARSDAWTLGGAISGSGLISQSSGLTVLTGNSGAFAGSTQVHGG
TLQVDGTLGGTTLIQNGGSLAGSGTLSGAVTVANGGTLLGAQGQTLSMGSLALSGASNVN
VVLGAPGGAGLFNVAGNLTLDGTLNVSDAGGFGVGVYRLFDYGGALTNNGLDVGLMPTGT
TGLVQTSVANKVNLVVNGTGAGSVQFWNGTTTTADGTIHGGAGTWTAGPTTNWTDAAGAQ
ANAWGGNFAVFQSNPDTVTVDGSAGAVMATGMQFIGQGWTVSGAPITLNGANGSTTIRVG
DGTAAGATDMAVIRSELTGASRLVKDDLGTLILAGANSYTGGTAINAGTLQIGDGGTTGS
ILGNVANNGKLAFNRSDATTFDGVISGAGSVDIRSGAVTFTADNGYAGPTTIFNAELRLG
NGGTTGSVVGNITNNGKLSFNRSNELIYGGVISGNGDIDHLTGRTVLTGNSSAFTGTTDV
IGGQLVVNGSLGGSLSVLSGGTLGGSGTVGNLLVAGTVAPGNSIGTLHVNGNIGFAAGSI
YQVEANAAGQADKIVASGTATLNGGTVQVLAGTGIYAPATAYTILSATGGVTGTFTAGVT
SNLAFLDPSLTYDANNVYLTLTRNNIDFAGVGLTPNQIAAGGGAESLGFGNPIYNAVLNL
SDTQAQYAFDQLSGEIHASARTALIEDSRFVRNAVNDRLRAAFDGVGASGGNVVTYENGK
PRTAAANTDGGAFWGQGFGSWGHTNSDGNAARLERSTGGFLMGADAPVFDTWRFGAVAGY
SYTDFNVKDRHSSGSADNFHLGLYGGNQWGDLAFRSGLAYTWHDIHTARTIAFPGFSDST
KGGYSAGTFQAFGELGYKVQAGAVQFEPFANLAYVSLNTSGFRETGGAAALTGASATTNA
TFTTLGLRASTSFDLGGATATAKGMVGWRHAFGDTTPQAGMAFASGGDTFSIGGVPIARN
AAVFETGLDIALSPTATVGVTYGGQFGSGVSDQSIKANFNVKF
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattggcaagtctcgcgggccggtaaaagcccagatcattggttcgcggtcttcc
cgtggctggcaggtatcgacctcggtgctcgcgcttgcactggccggcggtctggcaatg
cccatgccggctcatgcggatgactggatcggcacgatctccaacgactggtacaacgcc
ggcaactggagcgccggggtgccgacgggcgccggtacgaccgtgaacatcaataccatc
acgcccaatccaaccgttctcaacggcggcacggcctcggtcggcaatatcaatatcggc
atcagcggcgccgggtcgctggtggtttccggcggcggcaagctcaacggggccattggg
cgcgtcggggatgtcaccacagggacgatgacggttacgggtcccggctcggagtggaac
agcagcgggttcctcggcgtcggtatgtccggcacgggcgtactgaacatctctctgcgt
ggctccgttagcgccgcgtctgtcttccttggcaatagcgcgggttcttcaggcacggcg
acggtcgatggcgcgaccttgaccagcgccggagacctttatgtcggctacggcgggacc
gggacgctgaatatcgtgaacggcggtgaggttagcaatgttcatggtacgatcggcgtc
gacgcgggctcgactggcaccgtcacggtggacggcgcaggctccatttggaccaacagc
ggtgatctcacggtgggcgacagtggcaccggtacgctgaacattctgaacggcggtgcg
gtaaacagcaatttcgggtatatcggccgcactgctggcgccaccggaactgtgaccgtt
caaggggcgggttcgtcctggaccaacgccaactctctcgtcgttgggatgttgggcagt
ggtactttgaacatcttgaacggagcttctgtcagcaattcccactcatcggttgggcta
agcggcggtgggactggcacggcgttggtggacggaacgggttcaacctggaccaacacc
ggattactgaatgttggttcgaacggcactggcctgcttacgatttcgaacggcgggcat
gtcacaagtgctgagggcaacgtaggccttttcggccaagggacggcgacagtttcgggg
ccaggatcagattggtcgaactccggtgatctgacggtatcctacttcgccggcaccggt
acgttgacggtctccaatggcggcacggtcagcagcaatttcggatatattggccgtaat
gctggcagcaccgggactgtgacggttgagggggcgggttcgtcctgggccaacaccaac
tctctcgtcgttgggatgttgggcaatggtactttgaacatcttgaacggagcttctgtc
agcaattcccactcatcggttgggctaagcggcggtgggactggcacggccttggtggac
ggaacgggttcaacctggaccaacaccgggttactgaatgttggttcgaacggcactggc
ctgcttacgatttcgaacggcgggcatgtcacaagtgctgagggcaacgtaggccttttc
ggccaagggacggcgacagtttcggggccaggatcagattggtcgaactccggtgatctg
acggtatcccacttcgccggcaccggtacgttatcggtctcgaacggcggcacagtcagt
aactataatggctatatcggtcgcgaactaggcggaaccggcctcgtaacggttaacggt
gcgggctcgacttgggcgaatgccaataacctgcgtgtcggggacaacggctccggcaca
ctcacgatctcgaacggcggtacggtcagcaatatcaatgcaatgttagccgctcaggat
gactctagcggggcagtgtcagtcgatggcatcggctcagcctggacgaatagcggctat
ctctcaatcggcaaccgtggcaacgccacgttggcgatatcgagcggcggcgcggtcagc
agcaacggcggcgaaatcgctagtggcgcgctttccaccagtacggtgactgtctccggc
tctggttcgacatggaccaacagcgacaatctgattgttggcaatagtggcgtgggtacg
ctcagcatcaccggcggcggcaaggtcagcaactataatgccgtcctgggagcagtagcc
tacacctcctccggcactgtaaatgtcaacggtgcgggctcgacttggacgaatgccaat
aacctgcgtgtcggggacaacggctccggcacgctcacgatctcgaacggcggtacggtc
agcaatatcaatgcaatgttagccgctcaggatgactctagcggggcagtgtcagtcgat
ggcatcggctcagcctggacgaatagcggctatctctcaatcggcaaccgtggcaacgcc
acgttggcgatatcgagcggcggcgcggtcagcagcaacggcggcgaaatcgctagtggc
gcgctttccaccagtacggtgactgtctccggctctggttcgacatggaccaacaacggc
gacctgatagttggcgatagcggtgtgggtacgctcagcatcaccggcggcggcaaggtc
agcaactatagtgccgtcctgggagcaatagcgtacacctcctccggcacggtaaatgtc
gacggcgcgggctcgacatggaccaacagtgcggatctcatcgtcggcaaaagcggcacc
ggcacgctcaacatcaccggcggcggcaaggtcagcggcgactctggctaccttggtaag
gacgccacgggggccggcacggcaatggtgcagggtgcgggttcggcttggaccagcacg
ggtgttctcatggtcggcgactacggctccggcgggctgaccattctgaacggcggtgca
gtctccaatacgcttggtgtgatcggcaaccagacaggctccaatggcacggtgctggtc
gatggtgcgggctcaacctggaccaactccgcttcgttgtttgtcggcgcgactggaacc
ggttcgttgaccgtctcgaacggcgccgatgtcaccaatacagtcggctatattggcggc
ggcgctgccgcgtcgggaacggtaactgtcaccggcgccggttcgacgtggacaaacagc
ggcaaccttttagttggttctttcggcggcggcacgctgaccatttcgaatggcggcacc
gtctcgagccaggtcgcatctatcggcagttccgctggttcggtcggcgccgcgacggtc
actggcgcaggctcgaccttgaacaccagcagctcgctctatgtgggcgcagacggcgac
ggaacgctgacaatcgccaatggcggcacagtgaacgccctcggcggcgtgggaattacc
ggggatgcggcgtccaagggtacgctgaacatcggcggcgcagagggcgcggctgcggcc
gcggccggcatcctcaatacgacgggcgtgcagttcggcgcgggcaccggcaagctcaac
ttcaaccacaccaacgccaactatctgttcagcgcggatataatgggcgcaggcgcgatc
aatcaggtcgccggcacgacggtcctgaccggcaattcgtcgaccttcaccggcacgacc
ggcgtttcaggcggacgtctgatggtgaacggcatgctgggcggcacaacctcggtgacg
tcgggcggtgcgctcggcggctcgggaacgttgaccggtccggtgtcggttgcgagcggc
ggcgcgctgctgggcgtccagggtcagactctgggccttggttctctggctctgagctcc
ggctccaacgtcaacgtcgcgctgggggctccgggcggcgccggcctgttcaacgtcgcc
ggcaacctgacgctcgacggcacgctcaatgtcagtaatgcgggcggctttggcgccggt
gtctatcggatcttcgactatggcggcgcgctgaccgataacggcatggccgtcggctcg
gtgccgcttggcacagccgggacattgcagaccgcggtggccaatcaggtcaacctactg
gtttccggcacgacgctcgatacgcagttctggaacggcacgacgaccacggccgacggc
acgatccatggcggctcgggcgtatggtccgccggaccggccaccaactggaccgatgtg
aacggttcgacggcctccgcctggaccggtaacttcgcggtcttccagaacaatccgggc
gtcgtcacggtcgacacctcggccggcgcggtctccacgaccggcatgcagttcatgggc
cagaactggtcggtggcgggcggtccggtcacgctcaacggcgcgggcggtgcgaccacc
atccgcgtcggcgacggcacagcggcgggcagttccgactacgccgtgatcagctccgaa
ctcacgggcgcgagccgtctcgtgaaggacgatctgggcctgctcgtcctgaccggcgcc
aacacctataccggcggcacgacggtcaacgcgggaacgctgcagatcggcgccaatgga
acgtccggctcgatccagggcgacatcatcaacaacagcaggctgttcttcgcccgtagc
gatgcctggaccctcggcggcgcgatttcaggctcgggcttgatcagccagtcgagcggc
ctgacggttctcaccggcaacagcggcgcctttgcgggctcgacccaggtacacggcggc
acgttgcaggtcgatggcacgctaggcggtacgaccctcatacagaatggcggctcactg
gccggttcgggcacattgtccggcgccgtgaccgttgccaacggcggcaccctgctcggc
gctcaggggcagaccttgagcatgggctcgctggctctgtcgggcgcttcgaacgtcaat
gtggtgctcggcgctccgggcggcgcgggcctgttcaacgtcgccggtaacctgaccctc
gacggcacgctcaacgtctccgacgcgggcgggtttggcgtcggcgtctatcgcctcttc
gactatggcggcgcgctgaccaataacggcctcgacgtcggcttgatgccgaccggtacg
accggcctggtgcagacgtcggtggccaacaaggtcaatctcgtcgtcaacggcaccggc
gccggatcagtccagttctggaacggcacgaccacgacggccgatggcacgatccatggc
ggtgctggcacctggacggcgggaccgaccaccaactggaccgacgcggccggtgcacag
gccaatgcctggggcggcaacttcgctgtcttccagagcaatcctgacacggtgacggtc
gatggttcggctggcgcggtcatggcgaccggcatgcagttcatcggtcagggctggacg
gtctcgggtgctccgatcacgctgaacggggcgaatggctcgaccacgatccgcgtcggc
gacggtacggcggcaggcgccaccgacatggccgtgatccgttcggagttgaccggcgca
agccgtctggtgaaggacgatctgggcacgctgatcctggcgggcgccaacagctatacc
ggcggcacggcgatcaacgccggtacgttgcagatcggcgatggcggcacgactggctcg
atcctgggcaacgtcgccaacaacggcaagctcgccttcaaccgtagcgacgccaccacc
ttcgacggcgtgatctccggtgcgggctctgtcgatatccgcagcggcgccgtcaccttc
acggccgacaacggctatgccgggccgacgaccatcttcaacgcggaactgcggctgggc
aatggcggcacgaccggctcggtcgtgggcaatatcactaacaacggcaagctcagcttc
aaccgctcgaatgagttgatctatggcggtgtgatctccggcaatggcgacatcgaccac
ctgacgggccgcaccgtcctgaccggaaactccagcgcgttcaccggcacgaccgatgtg
atcggcggccagctcgtggtcaacggctcgctcggcggctcgctctccgtcctaagcggc
ggcacgctgggcggttcgggtacggtcggcaatctgctggtcgccggcaccgtggccccc
ggcaattccatcggcaccctccacgtcaacggcaatatcggctttgcggccggttcgatc
tatcaagtcgaagccaatgcggcgggccaggccgacaagatcgtcgcctccggtacggcc
accctcaatggcggcacagtgcaggttctggcgggcacgggcatctatgcccccgccaca
gcgtacacgatcttgtcggccacgggcggcgtcaccggcacgttcaccgccggcgtaacc
tcgaacctggccttcctcgatccgtcgctgacctatgacgcgaacaacgtctatctgacg
ctgacgcgcaacaatatcgacttcgccggggtcggcctcacgccgaaccagatcgcggcg
ggcggcggcgccgaaagcctcggcttcggcaacccgatctacaatgccgtgctcaacctc
tccgatacgcaggcccaatacgccttcgatcagctctcgggcgaaatccacgcttcggcg
cgaaccgccctgatcgaagacagccgtttcgtacgcaatgccgtcaatgaccggctgcgc
gccgcctttgatggcgtcggcgcttcgggcggcaacgtcgtcacctatgagaatggcaag
ccgcgcaccgctgctgccaataccgacggcggggccttctggggccagggcttcggttca
tggggccataccaacagcgacggaaacgcagcgcggctcgaacgttcgaccggcggtttc
ctgatgggggcggacgctccggtgttcgatacctggcgcttcggcgcggtcgccggctac
agctacaccgacttcaacgtgaaggatcgccattcctcgggttcggccgacaacttccac
ctcggtctctacggcggcaaccagtggggcgatctcgccttccggtcgggtcttgcctat
acgtggcatgacatccacacggcgcgcaccatcgccttcccgggcttctccgacagcacg
aagggcggttacagcgccggcacgttccaggcgttcggcgagctgggctacaaggttcag
gctggcgcggttcagttcgagcccttcgccaatctcgcttatgtgagcctcaacaccagc
ggcttccgcgagaccggcggcgctgctgcgctcaccggcgccagcgccaccacgaacgcc
accttcaccacgcttggcctgcgcgcttcgaccagtttcgatctgggcggggccaccgcg
acggccaagggcatggtcggctggcgtcacgccttcggcgacaccacgccgcaggccggc
atggcgttcgcttcgggcggcgacaccttctcgatcggaggcgtaccgatcgcccgcaac
gccgccgtctttgaaaccggcctcgacatcgccctgtcgccgaccgccaccgtcggcgtc
acctatggcggccagttcgggtcgggcgtctccgatcagtcgatcaaagccaacttcaac
gtgaagttctga
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