KEGG   Shinella zoogloeoides: K8M09_20160
Entry
K8M09_20160       CDS       T07727                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
szo  Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:szo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:szo03016]
    K8M09_20160
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:szo02048]
    K8M09_20160
Transfer RNA biogenesis [BR:szo03016]
 Prokaryotic type
  tRNA degradation factors
   K8M09_20160
Prokaryotic defense system [BR:szo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    K8M09_20160
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: UEX84026
LinkDB
Position
unnamed1:121591..121992
AA seq 133 aa
MPRYMLDTNMCIYLMKNQPEAVARRFAACQVGDVVMSAITYAELQYGVAVARDPAREGGN
LKDLVELIPVLPFDRLAGDAYGPARLATRERRSDHLDKLIAAHAIAADAVLVTNNIRDFT
AYPDLRLENWLDS
NT seq 402 nt   +upstreamnt  +downstreamnt
atgccgcgctacatgctcgacacgaacatgtgcatctacctgatgaagaaccagccggaa
gcggtggcgcgccgctttgcggcatgccaggtaggcgatgtcgtgatgtccgccattacc
tatgccgaattgcaatacggcgttgccgttgcgcgcgatccggcgcgggaaggcggcaac
ctcaaggatctcgtggagctgatccccgtcctgcccttcgaccggctcgcgggggacgcc
tatggaccggcgcgtctggcgacgcgcgagcgcaggtccgatcatctcgacaagctgatc
gccgcgcacgccatcgcggccgacgccgtgctcgtcaccaacaacattcgcgacttcacg
gcctatcccgatctccggctcgaaaactggctggacagctaa

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