Shinella zoogloeoides: K8M09_20775
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Entry
K8M09_20775 CDS
T07727
Name
(GenBank) Ig-like domain-containing protein
Organism
szo
Shinella zoogloeoides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
An_peroxidase
HemolysinCabind
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
UEX83842
LinkDB
All DBs
Position
unnamed1:257191..266658
Genome browser
AA seq
3155 aa
AA seq
DB search
MAIHLNQHDLAFILKQIQIAEAHSNGTPLTEIRLDAQGVPITDRAWYTDEDLFDATAPRA
VPDAKTPFGLRTVDGSYNNLLEGRELWGAADQPMPRYLDPNYIDGGAETPFSFGPGPLGP
VTNTDYGVDGVATFPGSGLNGGHTGNVVDSDPRVISNLVADMSANNPAALYAALVFAESA
DPYADLAELMAARVTQAQAAAMVVAAQTAFDAAMTALNGATAAYAANADPAAIAGLIDAI
QDAATDLAESGLALDHANALAADPNAGFLALAEDKGLVIQNGSLVIPNVAPDEGISAPFN
AWMTFFGQFFDHGLDLISKGGNGSIFIPLKADDPLIAGADGVFNTADDLPASMRFMVLTR
SETVLDENGVPTQRNTTTPFVDQNQTYTSHASHQVFLREYVMGPNGPVATGRLLGGQDGG
LATWADVKEQARTLLGIELTDGDVLNIPLIHTDAYGEFIRGANGLPQIVTGINPDGTPSG
LAAASLATPVNTFAAGALRIGHAFLDDIAHTANPFNSQTGTLKTADADNVVNDLNADGQI
TGTETPLPAGQYDDELLGRHFITGDGRGNENFGLTAVHHIFHSEHNRQTVIQKLTILEEG
DLAFVNEWLAVDIDAATLASIKASLQGPIDKNAYIENSALVWDGERIFQAARFATEMQYQ
HLVFEEFARKIQPAIDPFVFNSVTDINPAIFAEFANVVYRFGHSMLTDSLPRAFFSADAA
TNHLDVVDEGLIKAFLDPVDFDRDGGVSHEEAAGAIVRGMTNVRGNAIDEFVVDALRNNL
LGLPLDLAAMNIARGRDTGMPSLNQAREQLFAATGHSFLKPYANWTEFAVGLKNPLSVVN
FIAAYGTHAEIAAAQTLADKRAVAWELVFGVEADGVTASDIADRLDFINGAGQYAGDKGG
LDNVDLWIGGLAEKILLFGGMLGSTFTAIFEAQLEALQDADRFYYLTRTQGLNFVDALEN
NAFSKMIMANTDITMPGADGIRGTADDEVRHHIGIDSFTKYDHVLEVNVQYQQDYNGAEA
GKDPLGNDAVLEALGLTKVERDMPTAFQGYYQNYLRFFGGEHVVLGGSAGRDVLIGDVGD
DAIWGDAGNDYIEGGQGVDLIMGGAGDDVILDEGDDGDFIKGDAGDDVISSSSGLDILTG
GEGKDVVFAGVDSTEIFAGEGDDFLLGGDGADFLLGNEGDDWLEAGGGFDTTAGDNSELF
FNSTILGHDVMFAGSDEHDFDAESGDDIMVQGESVMRNEGMFGFDWASYQGAQFDADADM
RIRIFTTEEQDILRNRFDKVEALSGGDGNDNLRGDDRAAGDLPAVPTVNNTETLFFKDEL
SQAGLSRIEGLRALLGELVADVPEGNSESIVAFTGGNILLGGGGSDHLQGNGGDDFIDGN
ARLNVRIRIVGAGEENDADNEIATIYSLKHTFTGTEGAFVPTAWIGKTMFELLAAREIAP
SQMHIVREIIANDGDAADMDTAVFNDNLQNADGSFNYTITANGDGTVTVTHVNVSNIDDA
VTGRPLISDGTDTLRNIERLEFRDQVVLFTPPQLSLQRVMATRSETFGSQSYTDNDGIWN
DDWAESGDDGSATSDNGQIRISNGRLEFDGASQGVGDGAVIQRGVAGLAGAVSATVSFDY
GENIEAGETVLVQFSRDGNPANMQTLATITSASGTNTSTGTLALTGPFTAGAFIRFTVSA
MDNDANEVAWVDNLSIVGVTAQNVHYQATFTEGNGTATGADVPIASNPLIVENDRIVSAR
VVLTNAQAGDSFDIPGNLPGNINSSVQTVSGQIVVTLTGNEPNIANWQAALQAIEFRNNS
QTPSSVPRVIQVTVNDGFLDSNIATTTINVVPVNDLPNAGNDTILTNFSGNFSVPVWMLL
ANDTDADGQALNVTAVTDNQTQFAVALAAGMVNVTRTTTADRQFTYTVSDGAATDTANVS
VEIDATPTNGGNGAEILLGDAAGTTFNGNGGNDIIMAGGGNDIIAGGAGDDLIVWNAGDG
RDIVDGGGNVDTMRVIGNATAETYNIYTRAAWLALAGNTAAQLNVNTEIIIARGGTNNAA
IVAELDNIEEIVIDGMGGGDTFNQVGNFGGTSLLTSTITLNGGSGDDVVNLSGLSSAHRI
VFHSNGGNDTVIGNVRPQDVIQLAPGEDISGYTLTSNGNGTQTFSNGTHSITFTGTVPPQ
FQNGPSTGGTALDDEDLEDLLDMVRDPAFDRDSSGYGNNAEHPHWGAGGNPFIRLTEAHY
TDGASGIRQTALTPREISDILSNQDNDGNGVEESIPNSFGGTSLLTFFGQYFDHGLDFVA
KGQPGYVAIGSSSFPIDAPRSNIVPGTGVNGIPAEYINNTSPYVDQNQAYGSNNAITDVL
RKWEVGSNGEAVQTAYLLAGDVDATGRALLPTLSHLRDNYRVMTGGGELTSEDISNFDGS
GQPLLIDFIPVYSSPGQLDLDAIGHYFIAGDGRANENVMLTSMHTIWARNHNYWVDQIKE
QTDGAWTEAEYFEAARMMNIAEYQRVVFTEFATAMAGGFDGDDEHGFEGYDPDVDASISV
EFSQAAYRFGHSMLNETVSYVDGNGQLQQISLVQAFLNPGQLSSLGIDALIAGSVEVPHQ
AIDVDVVNALRNQLVGRPLDLAALNIFRGRDMGIAPFNTVRAELYDKTHLTALRPYTGWA
DFAQRNGISVAMLAKLQQAYPEGFETMDLWVGGLMEKPVAGQLGSTFGYIFLEQLNRLQH
GDKLYYLEIFDDSMFTGENNVTFAEIIERNTGLTGLPENVFDTDGSNAGDSDDDDILGNV
DDEDDTPDNGGDDGEDDEDEDDGGNPDDGEDDDQPDEDDDGGEDDDDEEDDGDEDDDDDG
DDDEDDDTPGGGDDEDDDDDDTPDDDDDGVVVPPASPSVRVGTPGADVLTGAAGADTIIG
HEGDDVLTGAGGADIIRGGAGDDFADGGDGRDVIFAGAGNDDVFAGADADMVYGEAGDDR
ILAQGGDDLVNAGAGNDTVFGGEGNDLFVAEAGDGNDTYYGDDMNGGGGVDTLDMAAITA
AITADLGTGYMTRGSVSSAQTGTDTLWNVENIVTGSGNDTITASAAVNIMDGGAGNDTFR
FLSAADANGDTILGFQPGDRLDLSGMDANGTTNGNQAFTLVTGAFTDRGQLLVTYETRAD
GDYTVVSGNTTGNADADFKISIKGTHNLAQSDFNL
NT seq
9468 nt
NT seq
+upstream
nt +downstream
nt
atggccattcatctcaaccagcacgatctcgctttcatcctgaagcagatccagatcgcc
gaagcccactccaacggtacgccgctcaccgagatccggctggatgcccagggcgtcccc
atcacggaccgcgcctggtacaccgatgaggatctcttcgacgcgacggccccgcgcgcc
gttcccgatgccaagacgcccttcggcctgcggacggtcgacggcagctacaacaacctc
ctggaagggcgtgaactgtggggagcggccgaccagccgatgccgcgctacctcgacccg
aactacatcgatggcggcgcggaaacgccgttctctttcggccccggcccgcttggcccg
gtcacgaacaccgattacggcgtcgatggtgtggccactttccccggtagcggcctgaat
ggcggccataccggcaatgtcgtggatagcgacccgcgcgtcatctccaacctcgttgcg
gacatgagtgcgaacaatccggcagccctctatgcggcgctcgtcttcgcggaatccgcc
gatccctatgcggacctggcggaactgatggccgcacgcgtcacgcaggcgcaggccgcc
gccatggtcgtagccgcccagacagccttcgatgccgcgatgacggcgctgaacggtgcg
acggccgcctatgcggccaacgcggacccggctgcgatagccggcctcatcgacgccata
caggatgcggccacggatctggccgagagcggtcttgcactcgaccacgccaatgctctg
gccgcggacccgaatgcgggcttcctcgcgctcgccgaggacaaggggctggtcatccag
aacggctcgctcgtcatcccgaacgttgcgcccgacgaaggcatctccgcgccgttcaac
gcctggatgaccttcttcggccagttcttcgaccatggcctcgacctcatcagcaagggc
ggcaacggctcgatcttcattccgctgaaagccgacgatccgctgatcgccggggcagac
ggggtcttcaacactgccgacgacctgcccgcctccatgcgcttcatggtgctgacgcgc
tcggagaccgttctcgacgagaacggcgtgccgacccagcgcaacacgacaacgcccttc
gtcgaccagaaccagacctatacctcgcatgcctcccatcaggtcttcctgcgcgaatat
gtcatggggccgaacggacccgtcgccacggggcggctgctgggcggacaggacggcggg
cttgccacatgggccgacgtgaaggagcaggcaagaacccttctgggcatcgaactgacc
gacggcgatgtgctcaacatcccgctcatccacacggacgcctatggcgaattcatccgc
ggcgccaatggcctgccgcagatcgtcaccggaatcaacccggacggcacgccgtccggt
ctggcagcagccagcctggcgaccccggtcaacacgttcgcggccggggccctgcgcatc
ggccacgccttcctcgacgacatcgcgcataccgccaatccgttcaacagccagacgggc
acgttgaagacggccgatgcggacaatgtcgtgaacgacctcaatgccgacggccagatc
acgggaactgaaaccccgctgcccgccggccagtacgacgacgagctgctcggccgccac
ttcatcaccggcgacgggcgcggcaacgagaatttcggcctcaccgccgtccaccacatc
ttccactccgagcataatcgccagacggtgatccagaagctgaccattctggaagagggt
gaccttgccttcgtcaatgaatggctggcggtcgatatcgacgcggccacgctggcgtcg
atcaaggccagcctgcaaggcccgatcgacaagaacgcctatatcgagaacagtgctctg
gtctgggatggcgagcgcatcttccaggccgcgcgctttgcgacggagatgcagtaccag
catctcgtcttcgaggagttcgcccgcaagatccagccggccatcgatcccttcgtgttc
aattcggtgaccgacatcaatccggcgatcttcgccgaattcgccaatgtcgtgtaccgc
ttcggccattccatgctcacggacagcctgccgcgggcgttcttctccgccgatgctgcg
acgaaccatctcgacgtcgtcgacgagggcctgatcaaggccttcctcgacccggtggac
ttcgaccgcgacggcggcgtctcgcatgaggaggctgccggggccatcgtgcgcgggatg
accaacgtgcgcggcaacgccatcgacgagttcgtcgtcgatgccctgcgcaacaacctg
ctcggcctgccgctcgaccttgccgcgatgaacatcgcccgcggccgggacaccggcatg
ccttcgctcaaccaggcccgcgagcagcttttcgccgcgaccggccacagcttcctgaag
ccctatgcgaactggaccgagttcgccgtcggcctgaagaacccgctctccgtggtcaat
ttcatcgcggcctacggcacccatgccgagattgccgccgcgcagacgcttgccgacaag
cgcgccgtcgcctgggaactggtgttcggggtggaagcggacggcgtcacggcgtccgat
atcgccgaccggctcgatttcatcaatggcgcaggccagtatgccggcgacaagggcggt
ctcgacaatgtcgacctgtggatcggcggccttgccgagaagatccttctcttcggcggc
atgctcggctccaccttcacggcgatcttcgaagcgcagctcgaggcgctgcaggatgcc
gaccgcttctactacctgacccgcacccagggcctgaattttgtcgatgcgctggaaaac
aacgccttctcgaagatgatcatggccaatacggacatcaccatgcccggcgccgacggc
attcgcggcacggcggacgacgaggtgcgccaccatatcggcatcgattccttcaccaag
tacgaccatgtcctcgaggtcaacgtccagtatcagcaggactataacggtgccgaggcc
ggcaaggacccgctgggcaacgatgcggtgctcgaagcgctcggccttaccaaggtggaa
cgcgacatgccgaccgccttccagggctattaccagaactatctgcgcttcttcggcggc
gagcatgtcgtgctcggcggctcggctggccgcgacgtgctgatcggcgatgtcggcgac
gatgccatctggggcgatgccggcaacgactatatcgaaggcggccagggcgtcgatctc
atcatgggcggtgccggggacgacgtgatcctcgacgagggcgacgacggcgacttcatc
aagggcgacgccggcgacgacgttatctccagctccagcggcctcgacatcctgacgggc
ggcgagggcaaggacgtcgtcttcgccggcgtggacagcacggaaatcttcgccggcgag
ggcgacgacttcctgctcggcggcgacggcgcggacttcctgctcggcaacgagggcgac
gactggctggaagccggcggcggcttcgacaccacggccggcgacaattccgaactgttc
ttcaactcgaccattctcggccatgacgtgatgttcgccggctctgatgagcacgatttc
gatgcggaatcgggcgacgacattatggtccagggcgagagcgtcatgcgcaatgagggc
atgttcggcttcgattgggcgagctatcagggcgcgcagttcgatgcggacgccgacatg
cgcatccgcattttcacgaccgaggaacaggatatcctgcgcaaccgcttcgacaaggtc
gaggcgctctcgggcggcgacggcaacgacaacctgcgcggcgacgaccgggcggccggc
gacctgccggcggtgccgaccgtcaacaacaccgagacgctgttcttcaaggacgaactc
agccaggccggcctctcgcgtatcgagggccttcgcgcgctgctcggcgagctggtggcg
gatgtgccagagggcaacagcgagagcatcgtggccttcaccggcggcaatatcctgctc
ggcggcggcggcagcgaccacctgcagggcaacggcggcgacgacttcatcgacggcaat
gcgcgcctcaatgtccgcatccgcatcgtcggtgccggcgaggagaacgacgccgacaac
gagatcgccacgatctactcgctgaagcacaccttcaccggcaccgagggcgccttcgtt
ccgaccgcctggatcggcaagacgatgttcgaattgctcgccgcgcgcgagatagccccc
agccagatgcatatcgtgcgtgaaatcatcgccaatgacggtgacgcggccgatatggat
actgccgtgttcaacgacaacctgcagaacgccgacggcagcttcaactacacgatcacg
gccaatggcgacggcaccgtgacggtcacgcatgtgaatgtcagcaacatcgacgatgcc
gtgaccggtcgtccgctgatttcggacggcaccgatacgctgcgcaacatcgagcggctg
gaattccgcgatcaggtggttctgttcaccccgccgcagctctccctgcagcgtgtgatg
gcgacgcgctcggaaaccttcggctcgcagagctacaccgacaatgatggcatctggaac
gatgactgggccgagagcggcgacgatggaagcgcgacctcggacaatggccagatccgc
atcagcaacggccggcttgaattcgacggcgctagccagggcgtcggtgacggcgcggtc
atccagcgcggtgtcgccgggctggccggcgcggtctcggccaccgtctccttcgactat
ggcgagaacatcgaggccggtgagacggtcttggttcagttctcccgggatgggaacccg
gccaacatgcagacccttgcaaccatcacaagcgcatccgggaccaacacctccaccggc
acgctggccctgaccggcccgttcacggccggtgcgttcatccggttcacggtttcggcc
atggacaacgatgccaacgaggtcgcctgggtcgacaatctcagcattgtcggcgtcacc
gcgcagaacgtgcactatcaggcaaccttcacggaaggcaatggaaccgcgaccggggcc
gatgtccccatcgccagcaatccgctgatcgtcgagaacgaccggatcgtttcggcgcgg
gtcgtcctgaccaatgcgcaggccggcgacagcttcgatattcccggcaatctgccgggc
aatatcaacagcagcgtgcagaccgtcagcgggcagatcgtcgtgaccctcacgggtaac
gaaccgaacatcgccaactggcaggccgcccttcaggcaatcgagttccgcaacaattcg
cagaccccgagcagcgtcccgcgggtcatccaggtcaccgtcaacgacgggttcctcgac
agcaatatcgcgaccacgacgatcaatgtggttccggtcaatgacctgcccaatgcgggc
aacgacaccatcctgactaatttttccggcaatttcagcgttccggtctggatgcttctg
gccaacgacaccgatgccgacgggcaggcgctgaacgtcacggctgtgaccgacaaccag
acacagtttgccgtcgccctcgcggccggcatggtcaatgtgacgcgcacgacgaccgcc
gaccggcaattcacctacacggtctcggacggtgctgcgacggataccgccaatgtaagc
gtggagatagacgcgacccccaccaatggtggcaacggtgctgaaatcctgctcggcgac
gcggccggaaccaccttcaacggcaacggcggcaacgacatcatcatggctggcggcggc
aacgatatcatcgctggcggcgctggggacgacctcatcgtctggaacgcgggcgatggc
cgggatatcgtcgacggcggcggcaatgtcgacaccatgcgcgtcatcggcaatgcgacc
gcggaaacctacaatatctacacgcgcgccgcctggctcgcgcttgccggcaacacggcc
gcgcaactcaacgtcaacaccgaaatcatcatcgcccgcggcggcaccaacaatgccgcg
atcgtcgccgagctcgacaatatcgaggaaatcgtcatcgacggcatgggcggcggcgac
acgttcaaccaggtcggcaatttcggcgggaccagcctcctgaccagcacgatcacgctg
aacggcggcagcggcgacgacgtcgtgaacctctcgggcctgtcctcggcccaccgcatc
gtcttccattccaatggcggcaacgatacggtcatcggcaatgtgcgcccgcaggatgtc
atccagcttgcgccgggcgaggacatttccggctatacgctgaccagcaacggcaacggc
acgcagaccttctcgaacggcacgcattcgatcaccttcacgggcacggtgccgccgcag
ttccagaatggtccgtcgaccggcggaacggctctcgacgacgaggatctggaagacctg
ctcgacatggtgcgcgatcccgccttcgaccgggattcctccggttacggcaacaatgcc
gaacatccccactggggcgctggcggcaatccgttcatccggctgacggaggcgcactat
acggacggcgcctcgggaatccgccagacggcgctcaccccgcgggaaatctccgacatc
ctgtccaatcaggacaatgacggcaacggcgtcgaggagagcattccgaacagcttcggc
ggaacgagcctgctcaccttcttcggccagtattttgaccatggcctcgacttcgtggcc
aaggggcagccgggttatgtcgccatcggctcctcttcgttcccgatagacgcgccgcgc
tccaacatcgtgcccggcacgggcgtcaacggcattccggccgagtacatcaacaacacc
tcgccctatgtcgaccagaaccaggcctacggctcgaacaatgcgatcacggatgtcctg
cgcaaatgggaggtcggcagcaatggcgaggccgtgcagacggcctacctgctggcgggc
gacgtggacgccacggggcgggccctgctgcccaccctcagccacctgcgcgacaactac
cgcgtgatgaccggcggcggcgaactgacctcggaggatatttccaacttcgacggctcc
ggccagcccctgctgatcgacttcatcccggtctattccagcccgggtcagctcgatctc
gacgccatcggccactacttcatcgccggtgacggccgggccaacgagaacgtgatgctg
acgtccatgcacacgatctgggccaggaaccacaattactgggtcgaccagatcaaggag
cagaccgacggcgcatggaccgaggccgaatatttcgaagcggcccggatgatgaacatc
gccgaataccagcgcgtggtcttcaccgaattcgcgaccgccatggccggcggcttcgat
ggcgacgacgagcacggcttcgagggctacgacccggatgtcgacgcctccatctccgtc
gagttctcccaggcggcctaccgcttcggccactcgatgctcaacgagacggtcagctat
gtggacggaaacggccagctccagcagatttcgctggtccaggccttcctgaaccccggc
cagttgtcgagcctcggcatcgacgcgctgattgccggctcggtcgaggtgccgcatcag
gccatcgacgtggatgtggtcaacgcgctgcgcaaccagctcgtcggccgtccgctggac
cttgccgccctcaacatcttccgtgggcgggacatggggatcgcaccgttcaatacggtg
cgcgccgaactctacgacaagacccatctgacggcgctgcgcccctatacgggctgggcc
gacttcgcccagcgcaacggcatctccgtcgccatgctggccaagcttcagcaggcctat
cccgaagggttcgagacgatggacctgtgggtcggcggtctcatggaaaaaccggtggcc
ggccagctcggctcgaccttcggctatatcttcctggagcagctcaaccgcctgcagcac
ggcgacaagctctactatctggagatcttcgacgactccatgttcaccggcgagaacaac
gtcaccttcgccgagatcatcgagcgcaacacgggcctcaccggattgccggaaaacgtc
ttcgacaccgacggttcgaatgcgggcgacagcgacgatgacgacatcctcggcaatgtc
gacgatgaggacgacacgcccgacaacggcggcgacgacggcgaggatgatgaagatgag
gacgacggcggcaatcccgatgacggcgaggacgacgaccagccggacgaggatgatgac
ggcggcgaagacgacgatgatgaggaggatgacggcgacgaagatgacgatgatgatggc
gacgacgatgaggacgacgacacccccggtggcggcgatgacgaggacgacgacgatgac
gacacgccggacgatgacgatgacggcgtcgtcgtgccgccggcatctccttcggtccgc
gtcggaacgccgggtgcggatgtcctgacgggcgctgccggtgcggacaccatcatcggc
catgagggcgacgacgtcctgaccggcgccggtggcgcggatatcatccgcggcggggcg
ggcgacgacttcgccgacggcggcgatggccgcgacgtcatcttcgcgggtgccggcaat
gacgatgtcttcgccggtgcggatgccgacatggtctatggcgaggccggggacgaccgc
attctcgcccagggcggcgacgacctggtgaatgccggcgccggcaacgacacggtgttc
ggtggcgagggcaacgacctcttcgtcgcggaagcgggtgacggcaacgacacctactac
ggcgacgacatgaatggcggcggcggcgtcgacacgctggacatggcggcgatcaccgcg
gcgatcacggccgatctcggtacgggctacatgacgcgtggcagcgtctcctccgcccag
acgggcacggacacgctctggaacgtcgagaacatcgtcaccggctccggcaacgacacg
atcacggcgagcgcggcggtcaacatcatggacggcggggccggcaacgacaccttccgc
ttcctctcggcggccgacgccaacggcgacacgatcctcggcttccagcccggcgaccgg
ctcgacctgtcgggcatggacgccaacggtacgacgaacggcaaccaggccttcacgctg
gtcaccggcgccttcaccgaccggggccagttgctggtgacctacgagacccgcgcagac
ggcgactacaccgtggtttccggcaacaccacgggcaatgccgatgccgatttcaagatc
agcatcaagggaacccataacctcgcgcagagcgacttcaacctctga
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integrated database retrieval system
