Shinella zoogloeoides: K8M09_21940
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Entry
K8M09_21940 CDS
T07727
Name
(GenBank) short-chain fatty acyl-CoA regulator family protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
szo
Shinella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
szo03000
]
K8M09_21940
Transcription factors [BR:
szo03000
]
Prokaryotic type
Helix-turn-helix
XRE family
K8M09_21940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
UEX84361
LinkDB
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Position
unnamed2:153674..155101
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AA seq
475 aa
AA seq
DB search
MATGKLYIGRRVRDLRQANRATQAQFAERLGISVSYLNQIENNQRPVSAGVLLALAEKFR
IDLAELSGGEGDRLVSALSETLSDSLFDGYAPSLQELKLITQNAPGFAHALITAHRAYRH
NSEQLASINDTLGRSLAAVEATPYEEVRDFFHFVDNYIGDLDLAAEKLAGEIGIGEADPG
PILAAYLERQYGVRILRAAGSDDLVRAYDPAARLLTLNSYLPAATRHFQIALQIAQLHAG
SIVDAVAAGAGFRTAEAGEICRIGLHNYFAGALLLPYGRFMAAAREVRHDLDLLAARFGA
SLEQVCHRLSTLQRPGQKGVPIFFARIDRAGNITKRHSATRLQFARFGAACPLWNAHQAF
ENPGRISRQLAETPDGVRYLCLSMQVSRGGRGFRQPQQHYALALGCEVSHAESFVYADDL
DLSNAGAYDPIGISCRICERAQCASRAVPPLKGRLVVEHHTRRTIPYSIRPVGEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggaaaactctatatcggccgccgggtgcgggaccttcgccaggcgaaccgg
gcgacacaggcgcagttcgccgagcgcctcggcatttccgtctcctatctcaaccagatc
gagaacaaccagcgccccgtctcggccggcgtgctgctggcgctggcggagaaattccgc
atcgaccttgccgagctttccgggggcgagggcgaccggctggtctcggcgctgtcggaa
acgctttcggattccctcttcgacggctatgcgccgagccttcaggaattgaagctcatc
acccagaacgcgccgggcttcgcccatgcgctgatcaccgcgcaccgcgcctaccgccac
aattccgagcagctcgccagcatcaacgacacgctgggccgcagcctcgccgccgtcgag
gcgacgccctacgaggaggtgcgcgacttcttccatttcgtcgacaactatatcggcgac
ctcgaccttgccgccgagaagctggcgggggagatcggcatcggcgaggccgatcccggc
cccatcctcgccgcctatctggagcggcaatacggcgtcaggatcctgcgcgcggccggg
agcgacgacctcgtgcgcgcctacgatcccgccgcccgcctgctgacgctgaattcctac
ctgccggccgcgacccgccatttccagatcgcgcttcagatcgcccagctccatgccggt
tccatcgtcgacgccgtggcggccggcgcgggcttccgcaccgccgaggcgggcgaaatc
tgccgcatcggcctgcacaattatttcgccggcgcgctgcttttgccctatggccggttc
atggcggcggcgcgcgaggtgcggcacgacctcgacctgctcgccgcccgcttcggcgcg
agcctcgaacaggtctgccaccggctgtcgaccctgcaacggccgggccagaagggcgtt
ccgatcttcttcgcccgcatcgaccgggccggcaacatcaccaagcgccacagcgccacg
cgcctgcaattcgcccgcttcggcgcggcctgtccgctgtggaacgcccatcaggccttc
gagaatcccggccgcatctcccgccagctcgccgagacgccggacggcgtgcgctacctc
tgtctttccatgcaggtctcgcgcggcgggcggggcttccgccagccgcagcagcactat
gcgctggcgctcggctgcgaggtctcccatgcggaaagcttcgtctatgccgacgacctg
gacctttccaatgccggagcctacgacccgatcggcatttcctgccgcatctgcgagcgc
gcccaatgcgccagccgcgccgtgccgccgctcaagggccgcctcgtcgtcgagcaccac
acgcgccgcaccattccctattcgatccggccggtgggggagggctga
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