Shinella zoogloeoides: K8M09_23270
Help
Entry
K8M09_23270 CDS
T07727
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
szo
Shinella zoogloeoides
Pathway
szo03420
Nucleotide excision repair
szo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8M09_23270
03430 Mismatch repair
K8M09_23270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szo03400
]
K8M09_23270
Enzymes [BR:
szo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8M09_23270
DNA repair and recombination proteins [BR:
szo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8M09_23270
MMR (mismatch excision repair)
Other MMR factors
K8M09_23270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UEX84418
LinkDB
All DBs
Position
unnamed3:complement(79541..81532)
Genome browser
AA seq
663 aa
AA seq
DB search
MLDDLIREEDVAWAAELMGLGPDGFAPVEGDDSRFRAMLRLDTVDFEACPGSGKTTLLVA
KLAVLAIRWAYRQQGICVLSHTNAARNEIGSKLSNTAAGIALMRYPHFVGTIHSFVNEYL
ALPWLRSKGVEVRCVDTQIALAKRWALLPRNTRWALQQANLTESCLIYTQPDYGGGATGR
FGAQTQTYQAIVTARRTSSEQGYFCFDEMFIWARELLDSCPEATRTLRRRYPLVFIDEAQ
DNSEAQSALLHRIFCEGDAPSRRQRFGDSNQAIYASSSQSGATTDLFPSGDVHPMPRSYR
FGQDLADKVQGLGVTPQPLIGAGPPDNIGTDPKERAIFLFDDGSVQEVLPRYGQHLLDTF
TAEVLERGVFTAIAGVHEPGGDDNIPRAMGHYVPTYDPSCVRKEASPSSFVQYLARARFE
SAAVGNTDKLVNATASALLAASELAGGTHGRMSRKSPHRRVVEILSEGGARASYRALQEI
VLTHAGEISPEVWAAQARALVEDIVRQLSGTAELDGTVVAFLTAPQAPIAAEGEAAILTR
TDNLFTYPADAPRVRVRLGSIHSVKGETHTATLVLDSFFHKHHLSELKPWLLGSKSGGST
TTPRGKKVLEGIRMLGRLKLHYVAMTRPTHLLCLAMRKDAFGDGELNTLADRGWRIIDCC
APA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgatctaatccgcgaagaagatgttgcctgggcggcggagctgatgggtcta
gggccggacggattcgcaccggtcgagggagacgacagccgatttcgggccatgctccga
cttgacaccgtcgatttcgaggcgtgccctggcagcggcaaaaccacattgcttgttgcg
aagctagccgttctggcgatccgctgggcgtatcggcagcagggcatctgcgtgttgtcg
cacaccaatgcagcgcgcaacgagatcggttcgaaattgagcaatacggccgcaggtatc
gctcttatgcgctatccccacttcgtcgggaccatccactcgtttgtaaacgagtatttg
gcgctgccatggctccggtcgaagggcgtcgaggtgcgctgcgtcgatacacagattgcg
ctcgcaaaacgttgggccctactacctcgcaatacgcgctgggcgttgcagcaggccaat
ctcacggaatcctgcctcatctatacccagccagactacggtggcggtgcgaccggcagg
tttggagcgcagacgcagacatatcaagccatagtgaccgcgcgccgaacttccagtgaa
caaggatacttctgcttcgacgagatgttcatctgggcaagggagcttttagatagctgc
ccggaggcaacccggactctccgtcgccgctacccgctcgttttcatcgatgaggcacag
gacaatagcgaagcacaatcagcgctactgcaccgaattttctgcgagggcgacgcacca
tcgcgcaggcaacgattcggcgattccaaccaggcaatctatgcaagttcgagccaaagc
ggagctacgacggatctctttccgagcggcgacgtgcatccgatgccacggagctatcgc
tttgggcaggatcttgccgacaaggttcaaggcttgggcgtcactccgcagcctctcatt
ggcgctggtccccccgataacattgggaccgacccaaaggaacgggcgatcttcctgttt
gacgatgggtccgtgcaggaagttttgccgcgctacggccagcatcttctggacaccttt
actgcagaggtcctcgaacgcggtgtttttaccgcaatcgccggcgttcacgaacctggt
ggcgatgataatatcccgcgtgcgatgggacactacgtacccacttatgatccttcgtgt
gtgagaaaagaggcttcaccgagcagcttcgtgcagtatctggcgcgggcgaggtttgag
tcagccgccgttgggaacaccgataaattggtgaacgccacggcgtcggcactgctagcc
gccagcgagcttgccggtggcacgcatggtcggatgtcgcggaagtctccgcatcgtagg
gtcgtggagatacttagcgagggtggcgcacgggccagctatcgcgcgttacaggaaatc
gtcctgacacatgcaggcgagatctctcccgaggtgtgggcggcgcaagcgcgagccctt
gtcgaagatatagtccggcagctcagcggaacggccgagttggatgggactgtcgtcgcg
ttcctcaccgctccccaagcgccaatcgctgccgaaggcgaggcagccatcttaacgcgc
accgataaccttttcacctacccggcagatgcgccgcgggttcgtgttcgtttgggatcg
atccactcggtgaagggcgaaacgcacacggcgacgctggtgctcgacagcttcttccat
aagcaccacctcagcgaactcaagccctggttactgggatcgaaatcgggcggttcgaca
acgactccccgcggcaagaaggtcttggagggcattcgaatgctcgggcggctcaaactg
cactatgttgcaatgacccgcccaacccatctgctatgccttgcgatgcgcaaggatgct
tttggcgacggagaactcaacacgcttgctgatcgcggttggaggatcatcgattgctgc
gcaccggcttag
DBGET
integrated database retrieval system
