Shinella zoogloeoides: K8M09_23515
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Entry
K8M09_23515 CDS
T07727
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
szo
Shinella zoogloeoides
Pathway
szo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K8M09_23515
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UEX84539
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Position
unnamed4:complement(12756..14489)
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AA seq
577 aa
AA seq
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MSQAKGRSPLPEKLDFRFADATTTGAVSGKRGLQVADWLKGFDPLKGVDLFGSKSSGSSF
DGVSTGWKIATEISKTVASHKARKKMEEDAARERERLRETLENPPPIHGSARWATATELN
QARILQPLSALDTPASILLGVFPDPELNDRPVGQIHWNGEGHLITVAPTRSGKSTTMIVP
NLLRYRGSCIVLDPKGELYRDTAGWRSTLGPVYRIAPFGKGSDGFNPLAAIDSFSDARAL
ASLLMPPDPKAQNFFRNDAIAFLTALIMFVVKGAPPERRTMQEIRDITAGPLAGLQQIAE
DMANSGVSAIANPATTMLGKRREALATLRDTFNSELAIWDDPGISEATREGIDFKALKDS
PATVYITVPFDKMEAYSSFLKVILASALDAMLRNERQPDIPVLFVLDEFLSLGPFPQFRD
AIRTHAGAGVRLWFFLQDLSTLEEHYPSSWKTFLNSAVKMFFGTNDAFTGRLVSELLLGE
ATVAHITGGVSSSGSTTGSEFFDKSTTRGHSINANVQFSQRPLLTATEVVSLLSTTNPDH
TRTGIITIGQISRPIKVRLVPWFLGQTCKARAALPVL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcaaaaggccgatcgccacttcccgaaaagcttgatttccgattcgcggat
gctaccactacgggagctgtgtcgggcaaaaggggcttgcaggtggcagattggctaaag
ggcttcgacccattgaagggcgtggatctgtttggcagcaagtcaagcgggagcagtttt
gacggggtttccaccgggtggaagattgcgaccgaaatttccaagaccgttgcgagccat
aaggcccgcaaaaaaatggaggaggacgcggcgcgcgaacgcgagcgtttgcgcgagacg
cttgagaacccgccgccgatccacggttcagcgcgctgggcgaccgcgacggagctgaac
caggcccgcattctccaaccgctgtcggcgttagacacgcccgcctcgatcctgctcggc
gtgtttcccgacccggaactcaacgacaggcccgtcggtcagatccactggaatggcgag
ggccatcttatcaccgtggctccgacacgttccggcaagtccacgacaatgattgtaccc
aacctgctgcgctatcgcggctcatgcatcgtccttgaccccaagggggaactttaccgc
gatacggccggatggcggagcactctcggacccgtgtaccggattgcgccgtttggcaaa
ggcagcgacggcttcaacccgctggccgccatcgattcattttccgatgcccgcgcgctc
gccagtctccttatgcctccagatcccaaggcgcagaacttcttccgtaatgacgcaatc
gcgttcctcaccgcactcatcatgttcgtggtgaaaggcgcgccgccggagcggcggacc
atgcaggagatccgcgacattacggccggtcccctcgccggtctgcaacagatcgcggaa
gacatggcgaactcgggcgtgtcggccatcgcaaacccggcaaccacaatgctgggcaag
cgccgtgaagcgcttgccacgctccgggacacgttcaattcggaactagccatttgggat
gaccccggcattagcgaggcgacacgcgaaggcatcgatttcaaggcacttaaggatagt
ccagcgacagtgtacatcactgtgcccttcgacaagatggaggcctactcgtccttcctg
aaggtcattctggcgtcggccctcgatgctatgctcaggaacgaacgccagccggacatt
cccgtactcttcgtcctggacgagtttctttcgcttggtcctttccctcagtttcgtgat
gccattcgcacgcatgcaggagctggggtccggctctggttctttctgcaggatctttca
actctggaagaacactacccttcctcctggaaaaccttcctgaactccgcagtgaagatg
tttttcggcaccaatgacgcgtttacggggcgcctcgtttcggaacttctgctcggtgag
gccaccgtagcacatattacaggcggcgtctcttcaagcggttcgaccaccggctcggag
ttttttgataaatcgaccacgcgcgggcattccatcaacgccaatgtgcagttcagccag
agaccgctcctgacggcaacggaggtggtcagcctcctcagcaccacgaacccggatcac
acccgcacggggataatcaccatagggcagatatcccggcctatcaaagtccggctcgtg
ccctggttcctcggtcagacgtgcaaggcgcgggccgctcttcctgtcctttag
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