Candidatus Nitrosocosmicus oleophilus: NMY3_00189
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Entry
NMY3_00189 CDS
T04185
Symbol
sdhA_1
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa00020
Citrate cycle (TCA cycle)
taa00190
Oxidative phosphorylation
taa00650
Butanoate metabolism
taa00720
Other carbon fixation pathways
taa01100
Metabolic pathways
taa01110
Biosynthesis of secondary metabolites
taa01120
Microbial metabolism in diverse environments
taa01200
Carbon metabolism
Module
taa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
taa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
taa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NMY3_00189 (sdhA_1)
00650 Butanoate metabolism
NMY3_00189 (sdhA_1)
09102 Energy metabolism
00190 Oxidative phosphorylation
NMY3_00189 (sdhA_1)
00720 Other carbon fixation pathways
NMY3_00189 (sdhA_1)
Enzymes [BR:
taa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NMY3_00189 (sdhA_1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
FAD_oxidored
GIDA
Thi4
DAO
Pyr_redox_3
FAD_binding_3
Lycopene_cycl
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
ALI34403
UniProt:
A0A654LVQ6
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All DBs
Position
163670..165487
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AA seq
605 aa
AA seq
DB search
MIENNGSKTNYFYDVIVIGGGSAGLRAAIEAHDNGSVVLLISKSKQGDPHTVLARGGINA
ALGIMDPKDNWMIHASDTLIEGEHIADYERVEILCKSAPEAVSELVNWGARFHMEEDGRL
TQRFFGAHTYRRTVFYEDWTGDEIIRVLMQQVKERKIDLMDNVYITKLLFKDNIENVDGH
PNSSSSKIKGAIGMDIKDKQLVKFNCKSLILASGGYTRVYSISSSRNYEHYGEGIDLAYE
AGVDLVDMEMVQFHPTGMVWPENSLGTLATEAIRGEGGILLNSKNERFMKEYYPERMELG
PRDVVARAIYNEIAEGRGTVHKGVWLDVTHLPLKKILDRLPTMYKQFKDIAGVDISREKM
EVGPTAHYSMGGLSVDINCKTKVEGLFAAGEVISQIHGANRLGGNSLLDTLVFGKIAGRE
ASIFAKQLPTPQEDNPSESEAYNDIQKFEKDLFVVLDNPLSFRKEIQDIMDQVAGIVRSA
SSLQKGLEKILALKDRFYSQIRIFQKNELNNENLIKNFIMTLEVRSSLVVCESIIRSAFM
RKESRGAHFRSDFPNIDNDVWHVNIYCTKVGGKMILYKQNVKEVKGILKEVIRDHSKPIH
NNESE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaataatggtagtaagactaattatttttatgatgtcatagttattggtggt
ggttctgccggtttaagagctgcgattgaggctcacgacaatggatcagttgttcttcta
attagcaagagtaaacaaggtgatcctcatacggtacttgcaagaggaggaatcaatgct
gcacttggtattatggaccccaaagataactggatgatacatgcctctgataccttaata
gaaggcgaacatattgcggattatgagagagttgaaattctttgcaagagtgctcctgaa
gctgtctctgaattagttaactggggtgctagatttcatatggaggaagatggtagacta
acacaacgtttctttggagctcatacatacagaagaactgttttttatgaagattggact
ggcgatgagataatccgtgtactaatgcaacaagtcaaggaaagaaaaatcgatctcatg
gataatgtctatattacaaagttgctatttaaagacaacatagaaaacgtggatggacat
ccaaattcttcatcatccaaaataaaaggagcaatcggcatggacatcaaagacaaacaa
cttgtaaagtttaattgcaaatctttaatacttgcttcaggtggatatacaagagtttat
tcgataagtagttctagaaattatgaacactatggtgaaggaattgatctggcatatgaa
gcaggagtagacttggtagatatggaaatggttcaatttcaccctacgggtatggtatgg
cctgaaaattcattaggtacacttgctactgaagctatccgaggagaaggaggtatttta
ctgaattcaaaaaatgaacggtttatgaaagaatattatccagaaaggatggaactgggt
cctcgagatgtagttgcacgagctatttacaacgagatagcagaaggaagaggtactgtc
cataaaggagtttggttagacgtcactcatcttcccttaaaaaaaattttggacagattg
cccacgatgtataaacaattcaaggacatagccggagtcgatatttctagagagaaaatg
gaagttggtcctactgcacattattctatgggcggattatcagtagacataaattgcaaa
acaaaagttgagggtttattcgcagcaggcgaggtaataagtcagattcatggtgccaac
aggttaggtggtaacagtctactagataccttggtttttggaaaaatagctgggagggaa
gcctcgatttttgcaaagcagttaccgaccccacaagaagataatccttcagagtcggaa
gcatataatgacatacaaaagtttgaaaaagatctttttgttgtattggataacccatta
agttttcgcaaagaaatacaagatataatggatcaagttgcaggaatagtaagaagtgca
tcaagtcttcaaaaagggttagaaaaaattctagctttaaaggataggttttattctcag
attcggatatttcaaaaaaatgaattaaataatgaaaacctcatcaagaatttcattatg
actttggaagtcagatcatctttggtcgtatgcgagtcgataataaggagtgcttttatg
cgaaaagaaagcagaggtgcgcactttcgttctgattttccaaatatcgataacgatgta
tggcatgttaatatctattgtaccaaagtaggtggaaaaatgatactatataaacagaat
gttaaagaagtaaaaggtatcctgaaagaagtaataagagatcattcaaaacccattcat
aataatgagtccgaataa
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