Candidatus Nitrosocosmicus oleophilus: NMY3_00342
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Entry
NMY3_00342 CDS
T04185
Symbol
ftsH_1
Name
(GenBank) ATP-dependent zinc metalloprotease FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
NMY3_00342 (ftsH_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taa03019
]
NMY3_00342 (ftsH_1)
03009 Ribosome biogenesis [BR:
taa03009
]
NMY3_00342 (ftsH_1)
04131 Membrane trafficking [BR:
taa04131
]
NMY3_00342 (ftsH_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
taa04147
]
NMY3_00342 (ftsH_1)
Messenger RNA biogenesis [BR:
taa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
NMY3_00342 (ftsH_1)
Ribosome biogenesis [BR:
taa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
NMY3_00342 (ftsH_1)
Membrane trafficking [BR:
taa04131
]
SNARE
SNARE associated proteins
Others
NMY3_00342 (ftsH_1)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
NMY3_00342 (ftsH_1)
Exosome [BR:
taa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NMY3_00342 (ftsH_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
CDC48_2
nSTAND3
AAA_33
Mg_chelatase
RNA_helicase
NPHP3_N
AAA_lid_PRS2_C
AAA_7
AAA_28
IstB_IS21
Parvo_NS1
AAA_24
AAA_17
Sigma54_activat
ABC_tran
AAA_3
ATPase
Zeta_toxin
AAA_18
SLFN-g3_helicase
Bac_DnaA
PhoH
DUF815
ATPase_2
bpMoxR
TsaE
NB-ARC
Vps4_C
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
ALI34556
UniProt:
A0A654LVT1
LinkDB
All DBs
Position
complement(290611..292872)
Genome browser
AA seq
753 aa
AA seq
DB search
MVDYDNKDQNHNQVISLKIAETDPKFVGKGMALVDPDVMERMQLKPGDVIEIISKKNKTT
YVLLWSGPPADYGRGLLRVDGYTRNNLCEGIDDRVTIKKVQNIEKSEQVIFSPTEDLNIV
GLEEHLPELLDGRVVTRGDIIPVNIMGRKIGFVVNSTSPTNRVTIIDSHLTEFIISSISK
DTSKGVMPRITYEDIGGLKNEVQKVREMIELPLRHPEIFERIGIESPKGVLLYGPPGTGK
TLLAKAVANETNANFYSIGGPEIMSKFYGESEERLRDIFKQAQEKSPSIIFIDEIDSIAP
KRGEVSGDVEKRIVSQLLTLMDGLMARGKVVVIGATNRPNAIDPALRRPGRFDREIEIGI
PDKDGRFDILQIHTRGMPLAENINLEQFAKVTHGFVGADLESLSKEAAMRSLRRELPKIN
MEQSKIPIEILNKIKITNNDFEEALKDIQPSALREIQIQRPNVTWEDIGGLSNVKDELSQ
VVEWPLKYPELFTEGDVKPPKGLLLYGPPGTGKTLIAKAVATTSESNFISIKGPELLSKW
VGESEKGIREVFRKARQSSPCVIFFDEIDSIVPRRNTGSGASDANVTERMVSQLLTEIDG
LEDLKGVTILGATNRPDIIDEALLRPGRFDRIIEIPLPDKNARRHILSIHSRKKPLDSTC
DLDRVTELTEGYTGADLEALVNAAAIAAIKDHISLMQNRETTDSNSLVNENHNNKITCDS
VKPKPIGLKIGMKHFEYALQRIKKKETLHSVIK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatgataataaagatcaaaatcataaccaagtgatatctctgaaaatagca
gagactgacccaaaatttgtaggaaagggtatggctcttgtagatccagatgtaatggaa
agaatgcaattaaagccaggagatgtgatagagataattagcaagaaaaacaaaacaaca
tatgttttgctatggtcaggtccacccgctgattatggaagaggtcttcttagagtggat
ggttatacacgcaataacttatgtgaagggatcgatgatcgtgtaactatcaaaaaggtt
caaaatatagaaaaatcagagcaagtcatattttcgccaacagaagatctcaatattgtt
ggcctagaagaacatcttcctgaattacttgatggaagagtagtaacaagaggtgatata
attcctgtaaatattatgggaagaaaaatcggatttgtagttaacagtacaagtcctact
aaccgggtaaccataatagattcacatctaactgaatttattattagctccatttcaaag
gacacttcaaagggtgtgatgcctaggatcacttatgaagatataggaggactaaaaaat
gaagtgcaaaaagtcagagaaatgatagaacttcctctcagacatcctgaaatatttgaa
agaataggtatagaatctccaaagggtgttcttctatatggaccgccaggaactggcaag
acactgttagcaaaagcagtagcaaatgaaacaaacgccaacttttattccattggtgga
ccagagataatgagtaaattctatggcgagtctgaagagcggttaagagatatctttaag
caggctcaagagaaatctccatccattatttttatagatgaaattgattccatagcgcca
aaaagaggagaagtctcaggtgacgtggaaaaaaggatagtgtctcaattattgaccttg
atggatggattgatggcaagaggaaaagtagtagtaattggagctacaaatagaccaaat
gctatagacccagctttaagaagaccaggtagatttgatagggaaattgaaataggaatt
ccagacaaggacggaagattcgatattcttcaaattcatactagagggatgcccttagct
gagaatataaatcttgaacagtttgctaaagtaacacatggatttgttggagcagacctt
gaatctttatcaaaggaagccgctatgcgatctcttcgtagggaactgcctaaaataaat
atggaacagtcaaaaataccaatagaaatccttaacaaaataaaaataactaataatgac
tttgaagaagcattaaaggatatacagccttctgctctcagggaaatccagattcaacgg
cctaatgtaacttgggaagatattggcgggttatccaatgttaaagacgaactgtcccaa
gtagtagagtggccacttaagtatcctgagttatttacagaaggggatgttaaaccacct
aaaggtcttttgttatatggacctccaggcacgggaaaaactttgatagcaaaggctgta
gcaactacatcagagtctaatttcatcagtatcaagggccctgaattgttatctaaatgg
gtaggagaatccgaaaaaggaataagagaagtatttagaaaggcaagacaatcttctccc
tgtgttattttctttgacgagattgattctattgttcctagaagaaataccggatcagga
gcatcggatgccaatgttactgaaagaatggtatctcagctattgaccgaaattgatggt
ctcgaagatttaaagggggtcaccatacttggagctacaaatagacctgacataatagat
gaagctttactgcgtccagggagatttgatagaataatagaaattcctctgccagataag
aatgctaggcgtcacatactgtcaatacattcaaggaaaaagccattggattctacatgc
gatcttgacagagtaacggagttaacggaaggctataccggtgcagatttagaagctttg
gtaaacgctgcagccatagcagctattaaagaccatattagtttgatgcaaaatcgggag
accacagactcaaattccctagtaaatgagaatcataacaataagataacatgcgatagc
gttaaaccgaaaccgatcggattaaagataggcatgaagcactttgaatatgcgttgcaa
aggataaagaaaaaagagacgttacattctgtcataaagtaa
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