Candidatus Nitrosocosmicus oleophilus: NMY3_00911
Help
Entry
NMY3_00911 CDS
T04185
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMY3_00911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taa03019
]
NMY3_00911
Messenger RNA biogenesis [BR:
taa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NMY3_00911
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NMY3_00911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
DUF7505
Motif
Other DBs
NCBI-ProteinID:
ALI35120
UniProt:
A0A654LWC7
LinkDB
All DBs
Position
839599..840225
Genome browser
AA seq
208 aa
AA seq
DB search
MNKTHEIDYIIPGKPLAIIEEFDAGKNTYLDEGEVRSSVIGKSSANMVDRILSVKQKNPP
MIPKIGDIIVGYIDMLFGNMISVRIVYINEKYSKSGFSAIASTRMSNSGGNYGSGWRERS
YKGKFVFKVGDIIRGRVFSLLNSSIHLTLEDRDLGVVYTICFSCGNEFVKVPGGLKCNSC
GNFEDRKVSIDYGKESFTLLYDKQFPMT
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaactcatgaaattgattatattattcctggaaaaccgttagctataattgaa
gaatttgatgcggggaaaaacacctatttagatgagggtgaggttagatcttctgttatt
ggaaaatctagcgctaacatggtcgatcgtattttaagtgttaaacaaaaaaatccacct
atgatacccaagattggtgatattattgttggatatatcgatatgttatttggaaatatg
atatcggtaaggattgtttatatcaatgaaaaatattctaaatctggtttttctgcgata
gcctcgactcgtatgtctaattcagggggaaactatggttcaggctggcgtgagagaagc
tataaaggtaaatttgtttttaaggtgggcgatattataaggggaagagtattcagctta
ttgaattcttcaattcatttaacattagaggacagagacttgggagttgtgtatacaatt
tgcttttcttgtggaaatgaatttgtcaaagtacctggaggattaaaatgcaattcctgt
ggtaattttgaagacaggaaagtttcaattgattatggaaaagaatcctttacacttttg
tatgataaacaatttcctatgacatga
DBGET
integrated database retrieval system
