Candidatus Nitrosocosmicus oleophilus: NMY3_00968
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Entry
NMY3_00968 CDS
T04185
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
Organism
taa
Candidatus Nitrosocosmicus oleophilus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RNA_helicase_helical
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALI35173
UniProt:
A0A654LXX7
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Position
894264..896576
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AA seq
770 aa
AA seq
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MIKYRQYQEDIVNRALYNNSLVVIPTSLGKTIVALLVSLDILLNWKKSKVLVLAPTRPLV
FQHFQLFKKNTFLLDQCIALTGKIGPEIRKTIWKSSSFRVYFATPELVKNDIRDGTLNKD
EFYLIIFDEAQRAVKDYSYTSISRHFYNNSDHGKHPLILGLSASPGAKEEKIKEICSNLF
IEQIIAKSERDDDVLPYIFDTNIEHYSIEMNDYQKDLSALLNSLINDKILWLINNQFIRK
RKVESVYRKDLLSLGDYIKSKLDPKNMNFFLLRALKVQSLSLILLYCRDLVESQGSFALK
KFLDNAKDNFASKTYQELFLDSRVNEIIEKLKDHNNEPPPKLIKVLSVVSQFLDLKEDIK
TSWSSSRDTDTFITKQGNLNYKDCKDKLVPTNYQKKILIFSQYRDTLEEITNFLNYNCIP
CRGFYGQSNKNGQRGLSQDKQLSILGDFKMGKFPVLVATSVAEEGLNIPNVDLVLFYEPV
PSEIRFIQRKGRTGRFSNGKVVILISKNSIDTKYLEISKRKVNRMKSSLQNSNFIFEKHD
KRTFKNPDKMLESELFFLYEKSKQYSESVNEDNYNENINPILDSISSNSNKKIKSLVKKL
SYRHRSSHDSEQSIPFTKRNLEDLYEVSLNLDRKKLVERVQRQIHDLLGKAGKTGLEVSY
LNEVMGIDHEIIGKAIENLTKMKRTIWLNKNTVALIESIKFISGSKYSVSVEKIVMGKAI
VIVNEKWYASLEPRDYFGPRALLKKGNTFDIIGELYRRAGTLHLIVKKII
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatatcgacaataccaggaggatattgtaaatagggctttatataataattca
ttagttgtgatccctacgtcattaggaaaaacaattgttgccttattagttagtcttgac
attttactcaactggaaaaaatcaaaagttctagttcttgctcctacgcgtcctttggtt
tttcaacattttcaattgttcaaaaagaatacttttctcttagaccaatgcattgcctta
acaggtaagataggaccagaaattagaaaaactatttggaaatcctcttcgtttagggtg
tactttgctacacccgagttggtaaagaatgatatccgagatggtacacttaataaagat
gaattttacttaattatatttgatgaagcccaaagagctgtcaaggactatagttataca
tccatttctagacacttttacaacaattctgatcatggtaagcatccactaatcctagga
ttatctgctagccccggagcaaaagaagaaaaaatcaaagagatttgttcaaatctattt
atagagcaaatcattgccaaatctgaacgagatgatgatgtgttaccatatatctttgat
actaacatagagcattactccatcgaaatgaatgattatcagaaggatctatcagccctg
ttgaattccttaatcaatgataaaatcttatggctaatcaataaccaattcataagaaag
aggaaggttgaaagtgtatatagaaaggatctcttgtcacttggagactatataaaatcg
aaactagatccaaaaaatatgaattttttcttacttcgtgctttaaaggttcaatctcta
tctctgatcttgttatactgtcgtgatttggttgaatcccaaggcagctttgctctcaaa
aaattcttagacaacgctaaagataacttcgcaagtaaaacttatcaagaactatttttg
gattcacgagtaaacgagataatcgaaaaattaaaggatcataataatgaacctccaccc
aaattaatcaaagtgttatcagtagttagtcagtttcttgatctaaaagaagacataaaa
acatcctggagttcatctagggatactgatacttttattactaaacagggtaatttgaat
tacaaagactgcaaagacaaactagtacctactaattatcaaaaaaagattttgattttt
tctcagtaccgtgatacgcttgaagaaatcacaaactttctaaattacaattgtataccc
tgtcgagggttctacggtcaatcaaataaaaatggacagagaggcctaagtcaggataaa
caattatccattcttggtgattttaaaatgggaaaattcccggtccttgttgctacgtca
gttgcagaggagggccttaacatcccaaatgttgatcttgtactattttatgaacctgtt
ccaagcgaaattcggtttatacaaaggaaaggtaggacgggtagattttccaatggaaag
gtagtcattctaatttctaaaaattctattgatacaaaatatttggagatctctaaaaga
aaagttaatcggatgaaatcaagtcttcagaattcgaattttatttttgagaaacatgac
aagagaactttcaagaatcccgacaaaatgcttgaatctgaactctttttcctgtacgaa
aaatccaaacaatattctgaatctgtaaatgaagataattacaacgaaaatattaatccc
attttggattccatttcttcaaattctaataagaaaattaaaagccttgtcaagaaactg
tcctaccgccatcgtagctcccatgattcagaacaatctataccttttacaaaaagaaac
ttggaagatctttatgaagtctcattgaatctggatagaaagaaattagtcgagcgagtt
caaagacaaatacatgacctactcggaaaggcagggaaaactggactagaagtttcatat
ctaaatgaggtaatgggcattgatcatgagattattggaaaggcgattgaaaacctaacc
aaaatgaagcgaactatatggctgaataagaatacagttgcattaatcgaatctatcaag
tttatatctggaagtaaatattctgtatccgttgaaaagattgtaatgggcaaagcaatt
gtaatcgttaatgaaaagtggtatgcttctttggaaccccgggattactttggtcctagg
gcgctattaaaaaaaggtaatacttttgatattattggcgaattatatcgacgtgcaggg
acacttcatttgattgtaaaaaaaataatctag
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