Candidatus Nitrosocosmicus oleophilus: NMY3_01968
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Entry
NMY3_01968 CDS
T04185
Symbol
ykoD
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taa03009
]
NMY3_01968 (ykoD)
Ribosome biogenesis [BR:
taa03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
NMY3_01968 (ykoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
Fer4_RLI
AAA_15
Fer4
Fer4_6
MMR_HSR1
AAA_23
Fer4_21
AAA_29
Fer4_9
Fer4_10
RsgA_GTPase
Fer4_7
Fer4_16
Fer4_2
DO-GTPase2
DUF5693
Fer4_3
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
ALI36170
UniProt:
A0A654LZF7
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Position
1786648..1788456
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AA seq
602 aa
AA seq
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MDKHGNLTHRVAVLDQELCQPRKCGLECIIYCPVNKTGGECIIQRPDDGKAVISEELCTG
CTICIKKCPFDAIVIVNLAQEIGVDKIHQYGVNSFRLYKIPIPKEGTVTGIVGRNGMGKS
TIINLLSGNIKPNFGNYDKELGWDEILTKLSNIELRKHFEKIQSKSLRTSIKPQLVYLIP
KVFKGTVSELLKKYDERGVSDLLIEELSLKYSLDRDLSTLSGGELQRVAVAVAAAKDAEY
YFFDEPSSFNDIYQRLAVGRVINNLAKEGKTVMIVEHDMSLLDYLSDNIYITYGEPGAYG
IVSSLQSTKVGINNFLEGYIPTENVRFRDKAYKFDISSITETVLSSSPIVEYTALTKTLG
QFSLTVDKGEIHEGEVVGIVGANALGKTTFMRMLAGIEKIDKGSLDTTVRISYKPQYLNQ
DIDGDVRSLIYSTNGGPFEGTTVEEHVFSPLGIKKLYDKSIKGLSGGELQKVAISLSLIR
PADVYALDEPSAFLDIEDRITFAKFIQRFTKSNGKSALIIDHDIQLIDLVSDRLVMFEGI
PGINGTGTSPTTKEIGMNNFLQSLSISFRRDETTGRPRVNKDSSRLDRQQKTDGNYYYLK
NK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttggataaacatggaaatttgactcatagagttgctgttttagaccaggaattgtgccaa
ccaagaaagtgtggtcttgagtgcatcatctattgtcctgtaaacaagactggtggggaa
tgtattattcaaaggccagatgatgggaaggctgttatttctgaggaattgtgtactgga
tgtactatttgtattaaaaagtgtccttttgatgctattgtaatagtaaatctggctcag
gaaattggtgtagacaaaatacatcaatatggagtcaatagctttaggttatataaaatt
cctataccaaaggaagggactgtaacaggtattgtgggtaggaacggtatgggaaagtct
acaataataaatctgctttcaggaaatataaaacctaattttggtaactatgataaggaa
ttaggttgggatgaaattttaacaaagttatcaaacatcgagcttcggaaacactttgag
aaaattcaatccaaatcattacgtacatcaataaaacctcagcttgtatatctaattcct
aaggttttcaaaggtacagtatctgaattactgaaaaaatatgatgagcggggggtttcg
gatttattgatagaagagttaagtctaaaatattccctggatagggacctttctacccta
agtggtggagaattacaaagggtagcagttgccgttgctgctgccaaggatgcagaatat
tacttttttgatgaaccttcttcttttaatgatatttatcagcgattggctgtgggacgg
gttattaataatttggctaaagagggtaaaactgtaatgattgtagaacatgatatgtct
ttacttgattacttatcagataacatctacatcacttatggagaacctggtgcctatggt
atcgtatcgtcacttcaaagcactaaagttggcataaataatttcttagaagggtatatt
cctactgaaaatgttaggttcagagataaagcgtataaatttgatatatccagtattacc
gagactgttctctcatcttcacctatagtggaatatactgctctaacgaaaacccttggt
caattctctctgactgttgataagggggaaattcatgaaggggaggtagttggaattgtt
ggggcaaatgccttgggtaagactacctttatgcgaatgctggctggcattgaaaaaatt
gataaaggtagcctcgacactaccgtaagaatatcctacaaacctcaatatctcaaccaa
gatatagatggcgatgttcgttcgctaatctattctacaaacggtgggccattcgaaggc
actacggtagaagagcatgtcttttctccactaggaatcaaaaagttgtatgacaaatcc
ataaaggggctcagtgggggtgaattgcaaaaggtggctatatcactatccctgataagg
ccggctgatgtgtacgcgctagatgaaccctctgcatttctcgatattgaagatagaata
acatttgcgaaattcatacaaagatttactaaatcaaatggcaagtctgcactaattata
gaccatgacattcaattaatagatctggtttcggataggttggttatgtttgaaggcatc
cctggtataaatgggaccggcacgtctcccactaccaaggaaattgggatgaacaatttt
cttcaatccctttcgatttcatttagaagagatgagacaactggtagacctagagttaac
aaagatagcagcaggctggacagacagcaaaaaacagatggtaattactactacttgaaa
aacaaatag
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