Candidatus Nitrosocosmicus oleophilus: NMY3_02031
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Entry
NMY3_02031 CDS
T04185
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NMY3_02031 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taa03400
]
NMY3_02031 (nfo)
Enzymes [BR:
taa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NMY3_02031 (nfo)
DNA repair and recombination proteins [BR:
taa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NMY3_02031 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ALI36233
UniProt:
A0A654M0W0
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All DBs
Position
1843171..1844040
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AA seq
289 aa
AA seq
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MVLKLGVHVSISGGISNSVDNAMKIGCTAFQVFTRSPRQWKTKELTSHETEIFKEKLGNS
PIDPESVVVHMPYLPNLSAPTSEMYEKSISVLTDEITRCNLLGIPHLVIHLGSHLGHGPK
NGINQLVKACTKSLYAYNDLGQSRNKVKILLENSAGQKNSIGSQIGEMQSIFDILGKKDY
GLCIDTCHLFAAGYDLSTESGVSALVDNIDSHLGLANIKIIHLNDSKGELGSNLDRHYHI
GLGKIGENGIRCLVNYKKLSHVPIIMETPIDSVRNDIDNIEFVRNVLCK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttggtcttaaaattaggagtacatgtgtctattagtggcggtatttcaaattcagttgat
aacgctatgaaaattggctgtaccgcatttcaggtatttaccagaagtccaagacaatgg
aagactaaagaattgacttcacatgaaaccgagatctttaaagaaaaattaggcaacagc
cccattgatcctgaatccgttgttgtacatatgccatacttgcctaatctttcggcacct
acaagtgaaatgtatgaaaaatcaatatcagtattgacagatgaaataacaaggtgtaat
ttgttgggtattcctcacttagttatacatctggggagtcatctaggtcatggaccaaaa
aatgggataaaccaacttgtaaaagcttgtactaaatcattatatgcttacaacgatcta
ggtcaatcaaggaacaaagttaaaatcttattggaaaatagtgcagggcaaaaaaatagt
attggaagtcagatcggtgaaatgcaaagcatattcgatatccttgggaaaaaagattat
ggtttgtgtatagacacatgtcatttatttgccgcggggtatgatttatctactgaaagt
ggtgtatcagcccttgttgacaatatagatagtcatcttggcttggcaaacataaaaata
attcatttaaacgactcaaaaggagaattaggatcgaaccttgataggcactatcacatt
ggtttaggaaaaattggagaaaacggtattagatgtttggtaaattacaagaaactaagc
cacgttccaattattatggaaactcctattgactctgttagaaatgatattgataacatc
gaattcgtaagaaatgttctatgcaagtga
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