Candidatus Nitrosocosmicus oleophilus: NMY3_02233
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Entry
NMY3_02233 CDS
T04185
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NMY3_02233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taa03021
]
NMY3_02233
Transcription machinery [BR:
taa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NMY3_02233
Prokaryotic type
Archaeal type
TFB
NMY3_02233
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_10
YmcF-like
RH_dom
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ALI36433
UniProt:
A0A654M1G7
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All DBs
Position
complement(2021092..2022012)
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AA seq
306 aa
AA seq
DB search
MHPEGKVENSKPLVCEFCKSDSVIFDNVSFEYVCSSCGCVSSQDPNSDSMASFRNNSGYN
DRTRTGMPESLAIHNKGLSTLIGIGDTDARGKALDSSQKNNIQRLRTWNNRAQLNDSVSR
NLEKALKLLNNFGDKLYLSQAVIEGAAYIYRKAAIKKLAKGRSTLGLVGAALYAACRETA
TPKTITDIATACNITTKDIMSHYKLILKELSLQMPVLHGPDYVTLICNRLQLSEKTKREA
LRIFSLVQQNRISIGKNPRALAGSIIYLASQNCNEFLRQVEICQVAEISTVSLRKRCKEI
KSKTEL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcatccagaaggcaaggtagagaattcaaagccactagtatgtgaattttgtaaaagt
gattctgttatttttgataatgtatcttttgaatatgtatgctcatcgtgcggttgtgta
tctagtcaggacccgaattctgactctatggcaagctttaggaataattcagggtataac
gacagaactagaacaggcatgcctgaatcacttgcaattcataacaaggggctttctaca
ttaattggaatcggggacactgatgcaagagggaaagccttagattcttctcaaaaaaat
aatatccaaagattaagaacttggaataacagagctcaacttaatgactctgtttctagg
aatttagaaaaagcgttaaaactcttgaataattttggagataaattatacttaagtcaa
gcggtcatagaaggagctgcctacatatacagaaaggcagcaatcaagaaattagccaag
ggacgttcaacactggggttagtaggggcagctttatatgcagcatgcagagaaacagct
actcctaaaaccattacagatatcgcaacagcttgtaatataaccaccaaagatatcatg
tctcattataaattaattttaaaggaactttctctgcagatgccagttttgcatggacct
gattatgttacgctgatatgtaaccgcctgcaactaagcgaaaagaccaagagagaagct
cttcggatattctcactagtacagcaaaacagaatttcaataggtaaaaatcctagggct
ctggcaggatccataatttatcttgcttcccagaattgtaatgaatttttaagacaagtc
gaaatatgccaagttgcagagatttcaactgtatcattaagaaaacgatgtaaagaaata
aagtcgaagacggagctctaa
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